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deepTMHMM Topology Viewer — SLC20A1 SLC20A1_chr2_112640939_112668825

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC20A1
Gene Namesolute carrier family 20 member 1
NCBI Gene IDGeneID:6574
EnsemblENSG00000144136.11
HGNCHGNC:10946
RefSeq ProteinNP_005406.3
Protein Length (ref)679 aa
Haplotypes6
TM Helices (ref)10
Distinct Topologies2
Ref (a0001) TopologyTMhelix(25-39)->TMhelix(64-77)->TMhelix(106-120)->TMhelix(133-143)->TMhelix(158-180)->TMhelix(197-215)->TMhelix(228-250)->TMhelix(535-544)->TMhelix(562-579)->TMhelix(650-672)
Genomic Regionchr2: 112640939-112668825
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼