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deepTMHMM Topology Viewer — SLC22A1 SLC22A1_chr6_160116815_160163718

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC22A1
Gene Namesolute carrier family 22 member 1
NCBI Gene IDGeneID:6580
EnsemblENSG00000175003.15
HGNCHGNC:10963
RefSeq ProteinNP_003048.1
Protein Length (ref)554 aa
Haplotypes17
TM Helices (ref)9
Distinct Topologies4
Ref (a0001) TopologyTMhelix(21-41)->TMhelix(150-170)->TMhelix(177-197)->TMhelix(200-224)->TMhelix(235-255)->TMhelix(263-278)->TMhelix(348-366)->TMhelix(377-397)->TMhelix(403-423)
Genomic Regionchr6: 160116815-160163718
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼