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deepTMHMM Topology Viewer — SLC22A4 SLC22A4_chr5_132289394_132349190

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC22A4
Gene Namesolute carrier family 22 member 4
NCBI Gene IDGeneID:6583
EnsemblENSG00000197208.6
HGNCHGNC:10968
RefSeq ProteinNP_003050.2
Protein Length (ref)551 aa
Haplotypes8
TM Helices (ref)12
Distinct Topologies3
Ref (a0001) TopologyTMhelix(20-40)->TMhelix(144-164)->TMhelix(171-191)->TMhelix(195-217)->TMhelix(228-252)->TMhelix(259-275)->TMhelix(339-359)->TMhelix(372-392)->TMhelix(399-418)->TMhelix(425-447)->TMhelix(459-482)->TMhelix(487-507)
Genomic Regionchr5: 132289394-132349190
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼