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deepTMHMM Topology Viewer — SLC23A1 SLC23A1_chr5_139362196_139388297

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC23A1
Gene Namesolute carrier family 23 member 1
NCBI Gene IDGeneID:9963
EnsemblENSG00000170482.17
HGNCHGNC:10974
RefSeq ProteinNP_005838.3
Protein Length (ref)598 aa
Haplotypes9
TM Helices (ref)14
Distinct Topologies1
Ref (a0001) TopologyTMhelix(46-66)->TMhelix(80-100)->TMhelix(104-124)->TMhelix(158-175)->TMhelix(183-201)->TMhelix(211-228)->TMhelix(251-274)->TMhelix(321-337)->TMhelix(359-373)->TMhelix(375-384)->TMhelix(403-423)->TMhelix(427-444)->TMhelix(459-472)->TMhelix(491-511)
Genomic Regionchr5: 139362196-139388297
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼