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deepTMHMM Topology Viewer — SLC28A1 SLC28A1_chr15_84879662_84950798

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC28A1
Gene Namesolute carrier family 28 member 1
NCBI Gene IDGeneID:9154
EnsemblENSG00000156222.12
HGNCHGNC:11001
RefSeq ProteinNP_004204.3
Protein Length (ref)650 aa
Haplotypes27
TM Helices (ref)11
Distinct Topologies4
Ref (a0001) TopologyTMhelix(84-104)->TMhelix(112-128)->TMhelix(150-170)->TMhelix(179-195)->TMhelix(206-222)->TMhelix(274-299)->TMhelix(340-354)->TMhelix(367-387)->TMhelix(411-431)->TMhelix(537-552)->TMhelix(572-586)
Genomic Regionchr15: 84879662-84950798
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼