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deepTMHMM Topology Viewer — SLC35C1 SLC35C1_chr11_45800149_45818016

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC35C1
Gene Namesolute carrier family 35 member C1
NCBI Gene IDGeneID:55343
EnsemblENSG00000181830.9
HGNCHGNC:20197
RefSeq ProteinNP_060859.4
Protein Length (ref)364 aa
Haplotypes5
TM Helices (ref)10
Distinct Topologies1
Ref (a0001) TopologyTMhelix(38-58)->TMhelix(74-95)->TMhelix(117-135)->TMhelix(140-160)->TMhelix(168-186)->TMhelix(196-216)->TMhelix(230-248)->TMhelix(266-286)->TMhelix(298-311)->TMhelix(321-340)
Genomic Regionchr11: 45800149-45818016
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼