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deepTMHMM Topology Viewer — SLC38A1 SLC38A1_chr12_46178063_46274043

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC38A1
Gene Namesolute carrier family 38 member 1
NCBI Gene IDGeneID:81539
EnsemblENSG00000111371.16
HGNCHGNC:13447
RefSeq ProteinNP_109599.3
Protein Length (ref)487 aa
Haplotypes3
TM Helices (ref)11
Distinct Topologies2
Ref (a0001) TopologyTMhelix(77-95)->TMhelix(101-121)->TMhelix(149-169)->TMhelix(190-212)->TMhelix(223-238)->TMhelix(275-293)->TMhelix(310-333)->TMhelix(352-372)->TMhelix(394-411)->TMhelix(417-439)->TMhelix(453-474)
Genomic Regionchr12: 46178063-46274043
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼