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deepTMHMM Topology Viewer — SLC38A2 SLC38A2_chr12_46353188_46377773

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC38A2
Gene Namesolute carrier family 38 member 2
NCBI Gene IDGeneID:54407
EnsemblENSG00000134294.14
HGNCHGNC:13448
RefSeq ProteinNP_061849.2
Protein Length (ref)506 aa
Haplotypes5
TM Helices (ref)11
Distinct Topologies1
Ref (a0001) TopologyTMhelix(77-95)->TMhelix(101-121)->TMhelix(150-177)->TMhelix(191-211)->TMhelix(218-238)->TMhelix(292-312)->TMhelix(330-350)->TMhelix(370-394)->TMhelix(413-431)->TMhelix(438-459)->TMhelix(473-495)
Genomic Regionchr12: 46353188-46377773
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼