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deepTMHMM Topology Viewer — SLC38A4 SLC38A4_chr12_46759761_46830997

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC38A4
Gene Namesolute carrier family 38 member 4
NCBI Gene IDGeneID:55089
EnsemblENSG00000139209.16
HGNCHGNC:14679
RefSeq ProteinNP_060488.2
Protein Length (ref)547 aa
Haplotypes14
TM Helices (ref)11
Distinct Topologies5
Ref (a0001) TopologyTMhelix(82-99)->TMhelix(105-125)->TMhelix(153-173)->TMhelix(196-216)->TMhelix(221-242)->TMhelix(332-350)->TMhelix(367-390)->TMhelix(410-434)->TMhelix(453-471)->TMhelix(477-499)->TMhelix(513-538)
Genomic Regionchr12: 46759761-46830997
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼