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deepTMHMM Topology Viewer — SLC38A8 SLC38A8_chr16_84004667_84047795

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC38A8
Gene Namesolute carrier family 38 member 8
NCBI Gene IDGeneID:146167
EnsemblENSG00000166558.11
HGNCHGNC:32434
RefSeq ProteinNP_001073911.1
Protein Length (ref)435 aa
Haplotypes23
TM Helices (ref)11
Distinct Topologies5
Ref (a0001) TopologyTMhelix(29-49)->TMhelix(56-79)->TMhelix(106-127)->TMhelix(151-166)->TMhelix(175-197)->TMhelix(215-234)->TMhelix(250-274)->TMhelix(294-314)->TMhelix(344-365)->TMhelix(371-392)->TMhelix(408-431)
Genomic Regionchr16: 84004667-84047795
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼