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deepTMHMM Topology Viewer — SLC39A1 SLC39A1_chr1_153954110_153968537

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC39A1
Gene Namesolute carrier family 39 member 1
NCBI Gene IDGeneID:27173
EnsemblENSG00000143570.19
HGNCHGNC:12876
RefSeq ProteinNP_001258887.1
Protein Length (ref)324 aa
Haplotypes3
TM Helices (ref)8
Distinct Topologies1
Ref (a0001) TopologyTMhelix(31-51)->TMhelix(68-88)->TMhelix(111-131)->TMhelix(180-200)->TMhelix(209-229)->TMhelix(238-260)->TMhelix(270-289)->TMhelix(303-322)
Genomic Regionchr1: 153954110-153968537
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼