← Back to Summary

deepTMHMM Topology Viewer — SLC40A1 SLC40A1_chr2_189555590_189585786

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC40A1
Gene Namesolute carrier family 40 member 1
NCBI Gene IDGeneID:30061
EnsemblENSG00000138449.11
HGNCHGNC:10909
RefSeq ProteinNP_055400.1
Protein Length (ref)571 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(26-51)->TMhelix(60-80)->TMhelix(94-114)->TMhelix(134-154)->TMhelix(183-199)->TMhelix(202-224)->TMhelix(307-329)->TMhelix(341-363)->TMhelix(373-393)->TMhelix(452-472)->TMhelix(492-514)->TMhelix(522-542)
Genomic Regionchr2: 189555590-189585786
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼