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deepTMHMM Topology Viewer — SLC46A2 SLC46A2_chr9_112873920_112895876

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC46A2
Gene Namesolute carrier family 46 member 2
NCBI Gene IDGeneID:57864
EnsemblENSG00000119457.8
HGNCHGNC:16055
RefSeq ProteinNP_149040.3
Protein Length (ref)475 aa
Haplotypes9
TM Helices (ref)12
Distinct Topologies3
Ref (a0001) TopologyTMhelix(24-44)->TMhelix(77-97)->TMhelix(107-129)->TMhelix(135-157)->TMhelix(173-191)->TMhelix(205-227)->TMhelix(284-304)->TMhelix(321-341)->TMhelix(348-368)->TMhelix(372-391)->TMhelix(407-430)->TMhelix(439-459)
Genomic Regionchr9: 112873920-112895876
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼