← Back to Summary

deepTMHMM Topology Viewer — SLC47A1 SLC47A1_chr17_19528854_19584034

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC47A1
Gene Namesolute carrier family 47 member 1
NCBI Gene IDGeneID:55244
EnsemblENSG00000142494.13
HGNCHGNC:25588
RefSeq ProteinNP_060712.2
Protein Length (ref)570 aa
Haplotypes9
TM Helices (ref)13
Distinct Topologies2
Ref (a0001) TopologyTMhelix(43-63)->TMhelix(71-96)->TMhelix(120-135)->TMhelix(158-175)->TMhelix(186-206)->TMhelix(217-237)->TMhelix(259-284)->TMhelix(296-316)->TMhelix(338-357)->TMhelix(374-392)->TMhelix(409-431)->TMhelix(435-458)->TMhelix(547-567)
Genomic Regionchr17: 19528854-19584034
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼