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deepTMHMM Topology Viewer — SLC49A4 SLC49A4_chr3_122790069_122886139

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC49A4
Gene Namesolute carrier family 49 member 4
NCBI Gene IDGeneID:84925
EnsemblENSG00000138463.9
HGNCHGNC:16628
RefSeq ProteinNP_116228.1
Protein Length (ref)478 aa
Haplotypes2
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(52-75)->TMhelix(91-111)->TMhelix(118-138)->TMhelix(147-167)->TMhelix(180-205)->TMhelix(230-250)->TMhelix(282-303)->TMhelix(317-339)->TMhelix(345-369)->TMhelix(381-401)->TMhelix(414-437)->TMhelix(443-463)
Genomic Regionchr3: 122790069-122886139
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼