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deepTMHMM Topology Viewer — SLC52A1 SLC52A1_chr17_5027602_5040426

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC52A1
Gene Namesolute carrier family 52 member 1
NCBI Gene IDGeneID:55065
EnsemblENSG00000132517.15
HGNCHGNC:30225
RefSeq ProteinNP_060456.3
Protein Length (ref)448 aa
Haplotypes14
TM Helices (ref)11
Distinct Topologies4
Ref (a0001) TopologyTMhelix(10-32)->TMhelix(47-68)->TMhelix(79-99)->TMhelix(113-133)->TMhelix(147-167)->TMhelix(196-216)->TMhelix(280-300)->TMhelix(315-335)->TMhelix(342-362)->TMhelix(373-395)->TMhelix(409-429)
Genomic Regionchr17: 5027602-5040426
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼