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deepTMHMM Topology Viewer — SLC5A11 SLC5A11_chr16_24840963_24916626

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC5A11
Gene Namesolute carrier family 5 member 11
NCBI Gene IDGeneID:115584
EnsemblENSG00000158865.13
HGNCHGNC:23091
RefSeq ProteinNP_001339177.1
Protein Length (ref)675 aa
Haplotypes10
TM Helices (ref)14
Distinct Topologies3
Ref (a0001) TopologyTMhelix(29-48)->TMhelix(72-87)->TMhelix(103-118)->TMhelix(146-166)->TMhelix(180-195)->TMhelix(205-220)->TMhelix(272-287)->TMhelix(310-326)->TMhelix(376-396)->TMhelix(419-439)->TMhelix(448-468)->TMhelix(480-500)->TMhelix(522-539)->TMhelix(651-671)
Genomic Regionchr16: 24840963-24916626
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼