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deepTMHMM Topology Viewer — SLC5A1 SLC5A1_chr22_32038261_32118029

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC5A1
Gene Namesolute carrier family 5 member 1
NCBI Gene IDGeneID:6523
EnsemblENSG00000100170.10
HGNCHGNC:11036
RefSeq ProteinNP_000334.1
Protein Length (ref)664 aa
Haplotypes4
TM Helices (ref)14
Distinct Topologies2
Ref (a0001) TopologyTMhelix(29-49)->TMhelix(70-87)->TMhelix(99-119)->TMhelix(145-165)->TMhelix(178-198)->TMhelix(201-223)->TMhelix(274-295)->TMhelix(314-334)->TMhelix(381-401)->TMhelix(424-444)->TMhelix(456-470)->TMhelix(486-506)->TMhelix(527-547)->TMhelix(643-663)
Genomic Regionchr22: 32038261-32118029
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼