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deepTMHMM Topology Viewer — SLC5A4 SLC5A4_chr22_32213464_32260347

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC5A4
Gene Namesolute carrier family 5 member 4
NCBI Gene IDGeneID:6527
EnsemblENSG00000100191.6
HGNCHGNC:11039
RefSeq ProteinNP_055042.1
Protein Length (ref)659 aa
Haplotypes12
TM Helices (ref)14
Distinct Topologies4
Ref (a0001) TopologyTMhelix(29-49)->TMhelix(70-87)->TMhelix(99-119)->TMhelix(145-169)->TMhelix(178-198)->TMhelix(201-223)->TMhelix(276-296)->TMhelix(314-334)->TMhelix(381-401)->TMhelix(423-444)->TMhelix(459-470)->TMhelix(485-506)->TMhelix(527-547)->TMhelix(638-658)
Genomic Regionchr22: 32213464-32260347
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼