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deepTMHMM Topology Viewer — SLC5A6 SLC5A6_chr2_27194587_27217268

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC5A6
Gene Namesolute carrier family 5 member 6
NCBI Gene IDGeneID:8884
EnsemblENSG00000138074.15
HGNCHGNC:11041
RefSeq ProteinNP_066918.2
Protein Length (ref)635 aa
Haplotypes9
TM Helices (ref)13
Distinct Topologies2
Ref (a0001) TopologyTMhelix(29-47)->TMhelix(70-87)->TMhelix(101-114)->TMhelix(149-164)->TMhelix(176-196)->TMhelix(200-222)->TMhelix(256-276)->TMhelix(296-316)->TMhelix(354-374)->TMhelix(396-416)->TMhelix(424-442)->TMhelix(456-476)->TMhelix(528-548)
Genomic Regionchr2: 27194587-27217268
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼