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deepTMHMM Topology Viewer — SLC5A8 SLC5A8_chr12_101150493_101215238

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC5A8
Gene Namesolute carrier family 5 member 8
NCBI Gene IDGeneID:160728
EnsemblENSG00000256870.3
HGNCHGNC:19119
RefSeq ProteinNP_666018.3
Protein Length (ref)610 aa
Haplotypes14
TM Helices (ref)13
Distinct Topologies2
Ref (a0001) TopologyTMhelix(15-35)->TMhelix(55-72)->TMhelix(85-100)->TMhelix(133-153)->TMhelix(162-182)->TMhelix(185-209)->TMhelix(242-262)->TMhelix(280-301)->TMhelix(337-360)->TMhelix(383-403)->TMhelix(412-432)->TMhelix(440-463)->TMhelix(522-542)
Genomic Regionchr12: 101150493-101215238
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼