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deepTMHMM Topology Viewer — SLC6A19 SLC6A19_chr5_1196595_1230111

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A19
Gene Namesolute carrier family 6 member 19
NCBI Gene IDGeneID:340024
EnsemblENSG00000174358.16
HGNCHGNC:27960
RefSeq ProteinNP_001003841.1
Protein Length (ref)634 aa
Haplotypes16
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(41-61)->TMhelix(68-88)->TMhelix(120-140)->TMhelix(193-213)->TMhelix(222-242)->TMhelix(268-288)->TMhelix(305-325)->TMhelix(415-435)->TMhelix(460-482)->TMhelix(488-508)->TMhelix(532-552)->TMhelix(581-603)
Genomic Regionchr5: 1196595-1230111
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼