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deepTMHMM Topology Viewer — SLC6A1 SLC6A1_chr3_10987748_11044247

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A1
Gene Namesolute carrier family 6 member 1
NCBI Gene IDGeneID:6529
EnsemblENSG00000157103.13
HGNCHGNC:11042
RefSeq ProteinNP_003033.3
Protein Length (ref)599 aa
Haplotypes4
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(53-73)->TMhelix(80-100)->TMhelix(132-152)->TMhelix(210-230)->TMhelix(239-259)->TMhelix(284-306)->TMhelix(332-348)->TMhelix(374-394)->TMhelix(422-447)->TMhelix(457-474)->TMhelix(498-517)->TMhelix(535-557)
Genomic Regionchr3: 10987748-11044247
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼