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deepTMHMM Topology Viewer — SLC6A2 SLC6A2_chr16_55650988_55711192

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A2
Gene Namesolute carrier family 6 member 2
NCBI Gene IDGeneID:6530
EnsemblENSG00000103546.19
HGNCHGNC:11048
RefSeq ProteinNP_001165972.1
Protein Length (ref)617 aa
Haplotypes6
TM Helices (ref)12
Distinct Topologies3
Ref (a0001) TopologyTMhelix(65-85)->TMhelix(92-112)->TMhelix(141-164)->TMhelix(233-253)->TMhelix(262-282)->TMhelix(307-329)->TMhelix(349-369)->TMhelix(402-417)->TMhelix(444-470)->TMhelix(475-495)->TMhelix(519-538)->TMhelix(556-575)
Genomic Regionchr16: 55650988-55711192
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼