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deepTMHMM Topology Viewer — SLC6A3 SLC6A3_chr5_1387794_1450440

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A3
Gene Namesolute carrier family 6 member 3
NCBI Gene IDGeneID:6531
EnsemblENSG00000142319.18
HGNCHGNC:11049
RefSeq ProteinNP_001035.1
Protein Length (ref)620 aa
Haplotypes3
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(69-89)->TMhelix(96-116)->TMhelix(143-164)->TMhelix(236-256)->TMhelix(265-285)->TMhelix(310-332)->TMhelix(355-372)->TMhelix(400-420)->TMhelix(447-473)->TMhelix(478-498)->TMhelix(522-541)->TMhelix(558-578)
Genomic Regionchr5: 1387794-1450440
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼