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deepTMHMM Topology Viewer — SLC6A4 SLC6A4_chr17_30189319_30240697

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A4
Gene Namesolute carrier family 6 member 4
NCBI Gene IDGeneID:6532
EnsemblENSG00000108576.10
HGNCHGNC:11050
RefSeq ProteinNP_001036.1
Protein Length (ref)630 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(88-108)->TMhelix(115-135)->TMhelix(165-185)->TMhelix(251-271)->TMhelix(280-300)->TMhelix(325-345)->TMhelix(370-387)->TMhelix(417-436)->TMhelix(465-489)->TMhelix(495-515)->TMhelix(539-558)->TMhelix(575-595)
Genomic Regionchr17: 30189319-30240697
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼