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deepTMHMM Topology Viewer — SLC6A5 SLC6A5_chr11_20594608_20664285

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A5
Gene Namesolute carrier family 6 member 5
NCBI Gene IDGeneID:9152
EnsemblENSG00000165970.12
HGNCHGNC:11051
RefSeq ProteinNP_004202.4
Protein Length (ref)797 aa
Haplotypes24
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(200-220)->TMhelix(227-247)->TMhelix(274-299)->TMhelix(392-412)->TMhelix(421-441)->TMhelix(466-486)->TMhelix(513-528)->TMhelix(557-583)->TMhelix(611-631)->TMhelix(635-655)->TMhelix(675-695)->TMhelix(715-735)
Genomic Regionchr11: 20594608-20664285
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼