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deepTMHMM Topology Viewer — SLC6A6 SLC6A6_chr3_14397606_14494349

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A6
Gene Namesolute carrier family 6 member 6
NCBI Gene IDGeneID:6533
EnsemblENSG00000131389.18
HGNCHGNC:11052
RefSeq ProteinNP_003034.2
Protein Length (ref)620 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(50-70)->TMhelix(77-102)->TMhelix(127-150)->TMhelix(216-236)->TMhelix(245-265)->TMhelix(290-310)->TMhelix(337-352)->TMhelix(380-400)->TMhelix(430-458)->TMhelix(465-482)->TMhelix(506-525)->TMhelix(543-563)
Genomic Regionchr3: 14397606-14494349
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼