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deepTMHMM Topology Viewer — SLC6A8 SLC6A8_chrX_153682926_153701588

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC6A8
Gene Namesolute carrier family 6 member 8
NCBI Gene IDGeneID:6535
EnsemblENSG00000130821.17
HGNCHGNC:11055
RefSeq ProteinNP_005620.1
Protein Length (ref)635 aa
Haplotypes6
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(61-81)->TMhelix(88-108)->TMhelix(140-160)->TMhelix(231-251)->TMhelix(260-282)->TMhelix(305-325)->TMhelix(346-367)->TMhelix(395-422)->TMhelix(445-473)->TMhelix(480-497)->TMhelix(521-541)->TMhelix(559-578)
Genomic RegionchrX: 153682926-153701588
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼