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deepTMHMM Topology Viewer — SLC8A2 SLC8A2_chr19_47423017_47476893

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC8A2
Gene Namesolute carrier family 8 member A2
NCBI Gene IDGeneID:6543
EnsemblENSG00000118160.14
HGNCHGNC:11069
RefSeq ProteinNP_055878.1
Protein Length (ref)921 aa
Haplotypes2
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) Topologysignal(1-20)->TMhelix(72-90)->TMhelix(131-148)->TMhelix(165-184)->TMhelix(198-219)->TMhelix(226-246)->TMhelix(722-742)->TMhelix(751-762)->TMhelix(764-773)->TMhelix(783-800)->TMhelix(823-840)->TMhelix(855-875)->TMhelix(893-913)
Genomic Regionchr19: 47423017-47476893
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼