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deepTMHMM Topology Viewer — SLC9C1 SLC9C1_chr3_112135898_112299216

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC9C1
Gene Namesolute carrier family 9 member C1
NCBI Gene IDGeneID:285335
EnsemblENSG00000172139.15
HGNCHGNC:31401
RefSeq ProteinNP_898884.1
Protein Length (ref)1177 aa
Haplotypes17
TM Helices (ref)17
Distinct Topologies4
Ref (a0001) TopologyTMhelix(15-33)->TMhelix(39-59)->TMhelix(78-93)->TMhelix(104-129)->TMhelix(139-154)->TMhelix(167-187)->TMhelix(208-234)->TMhelix(242-262)->TMhelix(266-277)->TMhelix(294-314)->TMhelix(327-352)->TMhelix(364-382)->TMhelix(400-419)->TMhelix(613-633)->TMhelix(644-664)->TMhelix(677-693)->TMhelix(707-717)
Genomic Regionchr3: 112135898-112299216
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼