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deepTMHMM Topology Viewer — SLCO1A2 SLCO1A2_chr12_21259600_21339917

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLCO1A2
Gene Namesolute carrier organic anion transporter family member 1A2
NCBI Gene IDGeneID:6579
EnsemblENSG00000084453.17
HGNCHGNC:10956
RefSeq ProteinNP_001373808.1
Protein Length (ref)670 aa
Haplotypes10
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(21-40)->TMhelix(58-80)->TMhelix(87-109)->TMhelix(158-180)->TMhelix(194-214)->TMhelix(246-265)->TMhelix(317-337)->TMhelix(354-377)->TMhelix(390-408)->TMhelix(512-535)->TMhelix(548-567)->TMhelix(600-622)
Genomic Regionchr12: 21259600-21339917
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼