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deepTMHMM Topology Viewer — SLCO4C1 SLCO4C1_chr5_102228986_102301284

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information
Gene SymbolSLCO4C1
Gene Namesolute carrier organic anion transporter family member 4C1
NCBI Gene IDGeneID:353189
HGNCHGNC:23612
RefSeq ProteinNP_851322.3
Protein Length (ref)724 aa
Haplotypes7
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(107-130)->TMhelix(145-165)->TMhelix(175-195)->TMhelix(230-250)->TMhelix(265-286)->TMhelix(315-333)->TMhelix(382-404)->TMhelix(419-443)->TMhelix(454-474)->TMhelix(579-600)->TMhelix(613-634)->TMhelix(662-689)
Genomic Regionchr5: 102228986-102301284
Topology Architecture Diagram
Topology Differences vs Reference (a0001)
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details
Summary Statistics