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deepTMHMM Topology Viewer — SPNS3 SPNS3_chr17_4428940_4493204

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSPNS3
Gene NameSPNS lysolipid transporter 3, sphingosine-1-phosphate (putative)
NCBI Gene IDGeneID:201305
EnsemblENSG00000182557.8
HGNCHGNC:28433
RefSeq ProteinNP_872344.3
Protein Length (ref)512 aa
Haplotypes11
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(46-69)->TMhelix(83-105)->TMhelix(112-131)->TMhelix(137-157)->TMhelix(175-195)->TMhelix(204-224)->TMhelix(260-281)->TMhelix(310-330)->TMhelix(343-363)->TMhelix(368-388)->TMhelix(406-423)->TMhelix(449-469)
Genomic Regionchr17: 4428940-4493204
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼