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deepTMHMM Topology Viewer — SVOP SVOP_chr12_108902741_109026068

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSVOP
Gene NameSV2 related protein
NCBI Gene IDGeneID:55530
EnsemblENSG00000166111.10
HGNCHGNC:25417
RefSeq ProteinNP_061181.1
Protein Length (ref)548 aa
Haplotypes1
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(86-106)->TMhelix(123-140)->TMhelix(151-171)->TMhelix(174-194)->TMhelix(210-232)->TMhelix(239-254)->TMhelix(318-337)->TMhelix(373-394)->TMhelix(401-421)->TMhelix(425-443)->TMhelix(467-482)->TMhelix(488-508)
Genomic Regionchr12: 108902741-109026068
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼