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deepTMHMM Topology Viewer — VANGL1 VANGL1_chr1_115636970_115703221

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolVANGL1
Gene NameVANGL planar cell polarity protein 1
NCBI Gene IDGeneID:81839
EnsemblENSG00000173218.15
HGNCHGNC:15512
RefSeq ProteinNP_620409.1
Protein Length (ref)524 aa
Haplotypes7
TM Helices (ref)4
Distinct Topologies3
Ref (a0001) TopologyTMhelix(113-133)->TMhelix(152-172)->TMhelix(184-206)->TMhelix(219-241)
Genomic Regionchr1: 115636970-115703221
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼