Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
SMARCA1_chrX_129441506_129528490	129506714	AG AG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01167.hp1 HG02165.hp2 others(4): Show HG01099.hp1 HG01167.hp1 HG02165.hp2 HG02922.hp2 HG02976.hp1 NA18990.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0114 a0001c0001t0001g0122 others(4): Show a0001c0001t0001g0065 a0001c0001t0001g0114 a0001c0001t0001g0122 a0001c0001t0001g0128 a0001c0001t0001g0134 a0001c0001t0001g0218 a0001c0001t0001g0243	7	279	0.0251	-1	c.967 others(8): Show c.967-504delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	7/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129508854	TG TG	T T	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0055 a0001c0001t0002g0055	1	279	0.0036	-1	c.811 others(8): Show c.811-759delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	6/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129509188	CA CA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00558.hp2 HG01070.hp2 others(76): Show HG00438.hp1 HG00558.hp2 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01109.hp1 HG01346.hp2 HG01496.hp2 HG01975.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02723.hp1 HG02886.hp1 HG02895.hp1 HG03041.hp1 HG03516.hp2 HG03540.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18975.hp1 NA18975.hp2 NA18981.hp1 NA18983.hp1 NA18985.hp2 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA18999.hp1 NA19001.hp1 NA19002.hp2 NA19003.hp1 NA19004.hp1 NA19006.hp1 NA19012.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp1 NA20129.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0008 a0003c0003 others(1): Show a0001c0001 a0001c0008 a0003c0003 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0001c0008t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0008t0001 a0003c0003t0002 a0005c0006t0002	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 others(72): Show a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0128 a0001c0001t0001g0210 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0008t0001g0136 a0003c0003t0002g0058 a0005c0006t0002g0043	79	279	0.2832	-1	c.811 others(9): Show c.811-1093delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	6/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129510275	AT AT	A A	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	279	0.0036	-1	c.810 others(9): Show c.810+1528delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	6/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129510601	CA CA	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02922.hp1 HG02055.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0224 a0001c0001t0001g0225	2	279	0.0072	-1	c.810 others(9): Show c.810+1202delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	6/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129511269	CA CA	C C	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	279	0.0036	-1	c.810 others(8): Show c.810+534delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	6/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129512265	AG AG	A A	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0054	1	279	0.0036	-1	c.631 others(8): Show c.631-283delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129512676	CT CT	C C	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0054	1	279	0.0036	-1	c.631 others(8): Show c.631-694delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129513319	GT GT	G G	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0054	1	279	0.0036	-1	c.631 others(9): Show c.631-1337delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129513445	AC AC	A A	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0054	1	279	0.0036	-1	c.631 others(9): Show c.631-1463delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129515058	TA TA	T T	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	279	0.0036	-1	c.630 others(8): Show c.630+628delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129515314	AG AG	A A	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	279	0.0036	-1	c.630 others(8): Show c.630+372delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	5/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129515857	AT AT	A A	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	279	0.0036	-1	c.529 others(7): Show c.529+36delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	4/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129516048	AT AT	A A	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	279	0.0036	-1	c.429 others(7): Show c.429-55delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	3/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129516790	TC TC	T T	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.262 others(8): Show c.262-294delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	2/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129517299	TA TA	T T	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.262 others(8): Show c.262-803delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	2/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129517627	CA CA	C C	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.261 others(8): Show c.261+733delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	2/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129517787	TA TA	T T	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.261 others(8): Show c.261+573delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	2/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129518383	TC TC	T T	frameshift_variant frameshift_variant	HIGH	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.238 others(4): Show c.238delG	p.Asp others(4): Show p.Asp80fs	SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	2/25	358/3989	238/3213	80/1070			chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129518659	GA GA	G G	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0007 a0007	a0007c0004 a0007c0004	a0007c0004t0001 a0007c0004t0001	a0007c0004t0001g0112 a0007c0004t0001g0112	1	279	0.0036	-1	c.175 others(8): Show c.175-213delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129520999	TC TC	T T	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0081	1	279	0.0036	-1	c.174 others(9): Show c.174+2197delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129521705	AT AT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	279	0.0036	-1	c.174 others(9): Show c.174+1491delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129522152	AT AT	A A	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0081	1	279	0.0036	-1	c.174 others(9): Show c.174+1044delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129522318	GA GA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0086 a0002c0002t0001g0086	1	279	0.0036	-1	c.174 others(8): Show c.174+878delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/24						chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129523420	CT CT	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0269 a0001c0001t0003g0269	1	279	0.0036	-1	c.-51 others(4): Show c.-51delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding	1/25				51		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129523597	AC AC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01346.hp2 HG01358.hp1 others(14): Show HG01081.hp2 HG01346.hp2 HG01358.hp1 HG01943.hp1 HG02257.hp1 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02723.hp1 HG02886.hp1 HG03041.hp1 HG03516.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18948.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 others(14): Show a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0125 a0001c0001t0001g0159 a0001c0001t0001g0233 a0001c0001t0001g0236 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0033 a0001c0001t0002g0034	17	279	0.0609	-1	c.-22 others(5): Show c.-228delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					108		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129523608	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	279	0.0036	-1	c.-23 others(5): Show c.-239delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					119		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129524163	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0081	1	279	0.0036	-1	c.-79 others(5): Show c.-794delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					674		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129525086	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-17 others(6): Show c.-1717delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					1597		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129525506	GA GA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0147	1	279	0.0036	-1	c.-21 others(6): Show c.-2137delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					2017		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129526095	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-27 others(6): Show c.-2726delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					2606		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129526208	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	279	0.0036	-1	c.-28 others(6): Show c.-2839delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					2719		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129526278	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-29 others(6): Show c.-2909delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					2789		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129526720	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00438.hp2 others(132): Show HG00140.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01884.hp1 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02055.hp1 HG02080.hp1 HG02135.hp1 HG02148.hp1 HG02165.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02602.hp1 HG02615.hp2 HG02647.hp1 HG02735.hp1 HG02738.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp1 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp1 HG03831.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18954.hp2 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18966.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19005.hp1 NA19030.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19066.hp1 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19081.hp1 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0007	a0001c0001 a0001c0008 a0002c0002 others(2): Show a0001c0001 a0001c0008 a0002c0002 a0006c0007 a0007c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0008t0001 a0002c0002t0001 a0006c0007t0001 a0007c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(128): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0174 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0221 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0263 a0001c0001t0001g0266 a0001c0001t0001g0268 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0019 a0001c0001t0002g0021 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0050 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0060 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0003g0269 a0001c0008t0001g0136 a0002c0002t0001g0086 a0002c0002t0001g0138 a0006c0007t0001g0161 a0007c0004t0001g0112	135	279	0.4839	-1	c.-33 others(6): Show c.-3351delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					3231		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129527057	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-36 others(6): Show c.-3688delG		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					3568		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129527292	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG01975.hp1 HG02040.hp1 HG00597.hp2 HG01975.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0130 a0001c0001t0001g0168 a0001c0001t0001g0108 a0001c0001t0001g0130 a0001c0001t0001g0168	3	279	0.0108	-1	c.-39 others(6): Show c.-3923delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					3803		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129527310	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00438.hp2 others(147): Show HG00280.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01358.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02922.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03831.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18985.hp2 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp2 NA20129.hp1 NA20129.hp2 NA20905.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0006 a0007	a0001c0001 a0001c0005 a0002c0002 others(4): Show a0001c0001 a0001c0005 a0002c0002 a0004c0009 a0005c0006 a0006c0007 a0007c0004	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0002c0002t0001 a0004c0009t0001 a0005c0006t0002 a0006c0007t0001 a0007c0004t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(141): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0122 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0152 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0209 a0001c0001t0001g0218 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0005t0001g0143 a0002c0002t0001g0086 a0002c0002t0001g0138 a0004c0009t0001g0262 a0005c0006t0002g0043 a0006c0007t0001g0161 a0007c0004t0001g0112	150	279	0.5376	-1	c.-39 others(6): Show c.-3941delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					3821		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129527748	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0084	1	279	0.0036	-1	c.-43 others(6): Show c.-4379delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					4259		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129527867	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-44 others(6): Show c.-4498delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					4378		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129528138	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0043 a0005c0006t0002g0043	1	279	0.0036	-1	c.-47 others(6): Show c.-4769delC		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					4649		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129528218	GA GA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00544.hp2 others(157): Show HG00280.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01256.hp1 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp1 HG03831.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18985.hp2 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp2 NA19006.hp1 NA19007.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp1 NA19089.hp2 NA20300.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0005 a0002c0002 others(5): Show a0001c0001 a0001c0005 a0002c0002 a0003c0003 a0004c0009 a0005c0006 a0006c0007 a0007c0004	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0002c0002t0001 a0003c0003t0002 a0004c0009t0001 a0005c0006t0002 a0006c0007t0001 a0007c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0068 others(150): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0122 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0152 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0200 a0001c0001t0001g0205 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0005t0001g0143 a0002c0002t0001g0086 a0002c0002t0001g0138 a0003c0003t0002g0058 a0004c0009t0001g0262 a0005c0006t0002g0043 a0006c0007t0001g0161 a0007c0004t0001g0112	160	279	0.5735	-1	c.-48 others(6): Show c.-4849delT		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					4729		chrX	TogoVar
SMARCA1_chrX_129441506_129528490	129528244	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG03453.hp2 NA19081.hp1 HG01243.hp1 HG03453.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0121 a0001c0001t0001g0241 a0001c0001t0001g0002 a0001c0001t0001g0121 a0001c0001t0001g0241	3	279	0.0108	-1	c.-48 others(6): Show c.-4875delA		SMARCA1	ENSG00000102038.16	transcript	ENST00000371121.5	protein_coding					4755		chrX	TogoVar
SMARCA2_chr9_2010347_2198620	2013263	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00323.hp2 others(128): Show HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp2 HG00438.hp2 HG00597.hp2 HG00639.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01109.hp1 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01978.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03831.hp2 HG03942.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp2 NA18951.hp1 NA18965.hp1 NA18971.hp1 NA18971.hp2 NA18980.hp2 NA18984.hp2 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18998.hp2 NA19002.hp1 NA19003.hp2 NA19005.hp2 NA19030.hp1 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19068.hp2 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 others(12): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0012 a0014 a0016 a0017 a0023	a0001c0001 a0001c0003 a0001c0008 others(38): Show a0001c0001 a0001c0003 a0001c0008 a0001c0009 a0001c0037 a0001c0040 a0001c0043 a0002c0002 a0002c0005 a0002c0010 a0002c0023 a0002c0027 a0002c0048 a0003c0006 a0003c0007 a0003c0012 a0003c0013 a0003c0029 a0003c0038 a0003c0056 a0004c0011 a0004c0014 a0004c0017 a0004c0026 a0005c0018 a0005c0019 a0005c0028 a0005c0052 a0006c0021 a0006c0031 a0006c0059 a0007c0022 a0008c0020 a0008c0060 a0009c0015 a0010c0044 a0012c0032 a0014c0050 a0016c0047 a0017c0046 a0023c0064	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(54): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0003t0001 a0001c0003t0002 a0001c0003t0005 a0001c0003t0006 a0001c0003t0009 a0001c0008t0002 a0001c0008t0004 a0001c0009t0001 a0001c0037t0001 a0001c0040t0001 a0001c0043t0001 a0002c0002t0001 a0002c0002t0002 a0002c0005t0001 a0002c0005t0002 a0002c0010t0001 a0002c0010t0002 a0002c0023t0001 a0002c0027t0001 a0002c0048t0001 a0003c0006t0001 a0003c0006t0002 a0003c0007t0001 a0003c0007t0002 a0003c0007t0018 a0003c0012t0010 a0003c0013t0001 a0003c0029t0001 a0003c0038t0001 a0003c0056t0003 a0004c0011t0001 a0004c0014t0001 a0004c0017t0001 a0004c0017t0003 a0004c0026t0002 a0004c0026t0003 a0005c0018t0002 a0005c0019t0001 a0005c0019t0002 a0005c0028t0001 a0005c0052t0002 a0006c0021t0002 a0006c0031t0001 a0006c0059t0002 a0007c0022t0001 a0008c0020t0001 a0008c0060t0001 a0009c0015t0002 a0010c0044t0002 a0012c0032t0007 a0014c0050t0002 a0016c0047t0001 a0017c0046t0005 a0023c0064t0002	a0001c0001t0001g0006 a0001c0001t0001g0040 a0001c0001t0001g0074 others(128): Show a0001c0001t0001g0006 a0001c0001t0001g0040 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0112 a0001c0001t0001g0119 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0166 a0001c0001t0001g0175 a0001c0001t0001g0187 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0220 a0001c0001t0001g0230 a0001c0001t0001g0265 a0001c0001t0002g0120 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0279 a0001c0001t0002g0293 a0001c0001t0013g0316 a0001c0003t0001g0066 a0001c0003t0001g0070 a0001c0003t0001g0190 a0001c0003t0001g0238 a0001c0003t0002g0248 a0001c0003t0002g0271 a0001c0003t0002g0277 a0001c0003t0002g0311 a0001c0003t0005g0128 a0001c0003t0006g0143 a0001c0003t0009g0236 a0001c0008t0002g0116 a0001c0008t0002g0227 a0001c0008t0002g0247 a0001c0008t0002g0290 a0001c0008t0002g0295 a0001c0008t0004g0223 a0001c0008t0004g0224 a0001c0009t0001g0042 a0001c0009t0001g0221 a0001c0037t0001g0017 a0001c0040t0001g0019 a0001c0043t0001g0090 a0002c0002t0001g0010 a0002c0002t0001g0095 a0002c0002t0001g0097 a0002c0002t0001g0100 a0002c0002t0001g0114 a0002c0002t0001g0125 a0002c0002t0001g0126 a0002c0002t0001g0169 a0002c0002t0001g0205 a0002c0002t0001g0240 a0002c0002t0002g0117 a0002c0002t0002g0208 a0002c0002t0002g0218 a0002c0005t0001g0068 a0002c0005t0001g0123 a0002c0005t0001g0124 a0002c0005t0001g0133 a0002c0005t0001g0145 a0002c0005t0001g0149 a0002c0005t0001g0254 a0002c0005t0001g0261 a0002c0005t0001g0308 a0002c0005t0001g0313 a0002c0005t0002g0016 a0002c0005t0002g0278 a0002c0010t0001g0137 a0002c0010t0001g0138 a0002c0010t0002g0209 a0002c0010t0002g0259 a0002c0023t0001g0013 a0002c0023t0001g0285 a0002c0027t0001g0309 a0002c0048t0001g0253 a0003c0006t0001g0146 a0003c0006t0001g0158 a0003c0006t0001g0233 a0003c0006t0002g0210 a0003c0006t0002g0215 a0003c0006t0002g0310 a0003c0007t0001g0067 a0003c0007t0001g0084 a0003c0007t0001g0193 a0003c0007t0001g0198 a0003c0007t0002g0250 a0003c0007t0002g0270 a0003c0007t0002g0273 a0003c0007t0002g0276 a0003c0007t0018g0127 a0003c0012t0010g0212 a0003c0013t0001g0003 a0003c0029t0001g0315 a0003c0038t0001g0018 a0003c0056t0003g0104 a0004c0011t0001g0101 a0004c0011t0001g0181 a0004c0014t0001g0078 a0004c0014t0001g0199 a0004c0017t0001g0144 a0004c0017t0003g0131 a0004c0026t0002g0118 a0004c0026t0003g0256 a0005c0018t0002g0246 a0005c0019t0001g0014 a0005c0019t0002g0302 a0005c0028t0001g0234 a0005c0052t0002g0244 a0006c0021t0002g0235 a0006c0031t0001g0314 a0006c0059t0002g0258 a0007c0022t0001g0025 a0008c0020t0001g0069 a0008c0020t0001g0252 a0008c0060t0001g0306 a0009c0015t0002g0275 a0010c0044t0002g0274 a0012c0032t0007g0222 a0014c0050t0002g0249 a0016c0047t0001g0141 a0017c0046t0005g0134 a0023c0064t0002g0260	131	316	0.4146	-1	c.-21 others(6): Show c.-2177delA		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding					2083		chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2019139	GA GA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp1 HG00544.hp2 others(39): Show HG00323.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01516.hp1 HG02004.hp1 HG02027.hp2 HG02132.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02572.hp1 HG02572.hp2 HG02647.hp2 HG02698.hp1 HG03927.hp1 HG06807.hp2 NA18941.hp1 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18954.hp1 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18979.hp2 NA18985.hp1 NA18994.hp2 NA19056.hp1 NA19060.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19088.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0009	a0001c0001 a0001c0003 a0001c0009 others(13): Show a0001c0001 a0001c0003 a0001c0009 a0001c0025 a0001c0037 a0001c0042 a0002c0002 a0002c0004 a0002c0034 a0002c0035 a0002c0036 a0003c0006 a0003c0013 a0003c0038 a0004c0024 a0009c0015	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0009t0001 a0001c0025t0001 a0001c0037t0001 a0001c0042t0001 a0002c0002t0001 a0002c0004t0001 a0002c0034t0001 a0002c0035t0001 a0002c0036t0001 a0003c0006t0002 a0003c0013t0001 a0003c0038t0001 a0004c0024t0001 a0009c0015t0001	a0001c0001t0001g0040 a0001c0001t0002g0035 a0001c0003t0001g0238 others(39): Show a0001c0001t0001g0040 a0001c0001t0002g0035 a0001c0003t0001g0238 a0001c0009t0001g0002 a0001c0009t0001g0034 a0001c0009t0001g0041 a0001c0009t0001g0042 a0001c0009t0001g0048 a0001c0025t0001g0001 a0001c0025t0001g0045 a0001c0037t0001g0017 a0001c0042t0001g0044 a0002c0002t0001g0064 a0002c0004t0001g0033 a0002c0004t0001g0037 a0002c0004t0001g0043 a0002c0004t0001g0046 a0002c0004t0001g0050 a0002c0004t0001g0053 a0002c0004t0001g0054 a0002c0004t0001g0055 a0002c0004t0001g0057 a0002c0004t0001g0058 a0002c0004t0001g0059 a0002c0004t0001g0060 a0002c0004t0001g0061 a0002c0004t0001g0062 a0002c0004t0001g0063 a0002c0004t0001g0065 a0002c0004t0001g0288 a0002c0034t0001g0056 a0002c0035t0001g0047 a0002c0036t0001g0028 a0003c0006t0002g0036 a0003c0013t0001g0003 a0003c0013t0001g0038 a0003c0013t0001g0039 a0003c0013t0001g0051 a0003c0038t0001g0018 a0004c0024t0001g0049 a0004c0024t0001g0052 a0009c0015t0001g0237	42	316	0.1329	-1	c.-37 others(9): Show c.-37+3746delA		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	1/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2019496	CA CA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01074.hp2 HG01993.hp2 others(13): Show HG00544.hp2 HG01074.hp2 HG01993.hp2 HG02071.hp1 HG02451.hp1 HG02615.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG03209.hp1 HG03225.hp2 NA18974.hp2 NA19068.hp2 NA19240.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0006 a0007 a0009 a0010 a0022	a0001c0001 a0001c0003 a0002c0004 others(9): Show a0001c0001 a0001c0003 a0002c0004 a0002c0023 a0003c0006 a0003c0007 a0003c0029 a0006c0031 a0007c0067 a0009c0015 a0010c0044 a0022c0062	a0001c0001t0001 a0001c0001t0004 a0001c0003t0002 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0002 a0002c0004t0001 a0002c0023t0001 a0003c0006t0001 a0003c0007t0001 a0003c0007t0002 a0003c0029t0001 a0006c0031t0001 a0007c0067t0001 a0009c0015t0002 a0010c0044t0002 a0022c0062t0002	a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0004g0194 others(13): Show a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0004g0194 a0001c0003t0002g0271 a0002c0004t0001g0037 a0002c0023t0001g0013 a0003c0006t0001g0196 a0003c0007t0001g0193 a0003c0007t0002g0270 a0003c0007t0002g0273 a0003c0029t0001g0315 a0006c0031t0001g0314 a0007c0067t0001g0027 a0009c0015t0002g0275 a0010c0044t0002g0274 a0022c0062t0002g0272	16	316	0.0506	-1	c.-37 others(9): Show c.-37+4110delA		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	1/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2027098	CT CT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00558.hp1 others(68): Show HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01109.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01346.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01952.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02056.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02723.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp2 HG03540.hp2 HG04184.hp1 NA18522.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp1 NA18950.hp2 NA18960.hp2 NA18965.hp2 NA18971.hp2 NA18980.hp1 NA18989.hp1 NA18995.hp1 NA19003.hp2 NA19030.hp1 NA19057.hp2 NA19058.hp1 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA20129.hp2 NA20300.hp1 NA20805.hp1	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0009 a0010 a0014 a0022 a0023 a0024	a0001c0001 a0001c0003 a0001c0008 others(20): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0002c0005 a0002c0010 a0003c0006 a0003c0007 a0003c0012 a0003c0069 a0004c0014 a0004c0017 a0004c0026 a0005c0018 a0005c0052 a0006c0021 a0006c0059 a0009c0015 a0010c0044 a0014c0050 a0022c0062 a0023c0064 a0024c0068	a0001c0001t0002 a0001c0001t0008 a0001c0003t0002 others(25): Show a0001c0001t0002 a0001c0001t0008 a0001c0003t0002 a0001c0003t0009 a0001c0008t0002 a0002c0002t0001 a0002c0002t0002 a0002c0005t0002 a0002c0010t0002 a0003c0006t0001 a0003c0006t0002 a0003c0007t0002 a0003c0012t0002 a0003c0012t0010 a0003c0069t0002 a0004c0014t0002 a0004c0017t0002 a0004c0026t0002 a0005c0018t0002 a0005c0052t0002 a0006c0021t0002 a0006c0059t0002 a0009c0015t0002 a0010c0044t0002 a0014c0050t0002 a0022c0062t0002 a0023c0064t0002 a0024c0068t0002	a0001c0001t0002g0035 a0001c0001t0002g0151 a0001c0001t0002g0206 others(68): Show a0001c0001t0002g0035 a0001c0001t0002g0151 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0225 a0001c0001t0002g0279 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0296 a0001c0001t0008g0011 a0001c0003t0002g0217 a0001c0003t0002g0248 a0001c0003t0002g0267 a0001c0003t0002g0271 a0001c0003t0002g0277 a0001c0003t0002g0311 a0001c0003t0009g0236 a0001c0008t0002g0116 a0001c0008t0002g0227 a0001c0008t0002g0247 a0001c0008t0002g0290 a0001c0008t0002g0295 a0002c0002t0001g0205 a0002c0002t0002g0117 a0002c0002t0002g0208 a0002c0002t0002g0218 a0002c0002t0002g0289 a0002c0002t0002g0297 a0002c0002t0002g0298 a0002c0002t0002g0299 a0002c0002t0002g0300 a0002c0005t0002g0016 a0002c0005t0002g0021 a0002c0005t0002g0245 a0002c0005t0002g0278 a0002c0010t0002g0209 a0002c0010t0002g0259 a0002c0010t0002g0268 a0002c0010t0002g0269 a0003c0006t0001g0233 a0003c0006t0002g0036 a0003c0006t0002g0210 a0003c0006t0002g0215 a0003c0006t0002g0310 a0003c0007t0002g0250 a0003c0007t0002g0270 a0003c0007t0002g0273 a0003c0007t0002g0276 a0003c0012t0002g0152 a0003c0012t0002g0292 a0003c0012t0010g0212 a0003c0069t0002g0200 a0004c0014t0002g0023 a0004c0017t0002g0022 a0004c0026t0002g0118 a0005c0018t0002g0246 a0005c0052t0002g0244 a0006c0021t0002g0024 a0006c0021t0002g0235 a0006c0059t0002g0258 a0009c0015t0002g0275 a0009c0015t0002g0286 a0010c0044t0002g0274 a0014c0050t0002g0249 a0022c0062t0002g0272 a0023c0064t0002g0260 a0024c0068t0002g0291	71	316	0.2247	-1	c.-36 others(9): Show c.-36-1886delT		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	1/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2030541	CT CT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp2 HG02451.hp1 others(10): Show HG01891.hp2 HG02055.hp2 HG02451.hp1 HG02486.hp2 HG02723.hp1 HG02809.hp1 HG03225.hp1 HG03516.hp1 NA18906.hp2 NA18975.hp2 NA19043.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0006 a0012	a0001c0001 a0001c0003 a0001c0016 others(7): Show a0001c0001 a0001c0003 a0001c0016 a0002c0023 a0002c0027 a0003c0029 a0003c0030 a0005c0028 a0006c0031 a0012c0032	a0001c0001t0001 a0001c0003t0001 a0001c0016t0001 others(8): Show a0001c0001t0001 a0001c0003t0001 a0001c0016t0001 a0001c0016t0012 a0002c0023t0001 a0002c0027t0001 a0003c0029t0001 a0003c0030t0001 a0005c0028t0001 a0006c0031t0001 a0012c0032t0007	a0001c0001t0001g0220 a0001c0003t0001g0085 a0001c0016t0001g0281 others(10): Show a0001c0001t0001g0220 a0001c0003t0001g0085 a0001c0016t0001g0281 a0001c0016t0001g0282 a0001c0016t0012g0283 a0002c0023t0001g0013 a0002c0023t0001g0285 a0002c0027t0001g0309 a0003c0029t0001g0315 a0003c0030t0001g0284 a0005c0028t0001g0234 a0006c0031t0001g0314 a0012c0032t0007g0222	13	316	0.0411	-1	c.225 others(9): Show c.225+1313delT		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	2/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2034242	CA CA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp2 HG00558.hp1 others(103): Show HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01109.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01496.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02055.hp2 HG02074.hp2 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03927.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18906.hp2 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18954.hp1 NA18960.hp2 NA18962.hp1 NA18965.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18975.hp1 NA18980.hp1 NA18985.hp1 NA18987.hp1 NA18995.hp1 NA19003.hp2 NA19005.hp2 NA19043.hp2 NA19056.hp1 NA19057.hp2 NA19058.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19088.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1	a0001 a0002 a0003 others(10): Show a0001 a0002 a0003 a0004 a0005 a0006 a0009 a0010 a0011 a0012 a0014 a0021 a0024	a0001c0001 a0001c0003 a0001c0008 others(38): Show a0001c0001 a0001c0003 a0001c0008 a0001c0009 a0001c0016 a0001c0025 a0001c0037 a0001c0040 a0002c0002 a0002c0004 a0002c0005 a0002c0010 a0002c0023 a0002c0027 a0002c0035 a0002c0036 a0003c0006 a0003c0007 a0003c0012 a0003c0013 a0003c0029 a0003c0030 a0003c0038 a0003c0069 a0004c0011 a0004c0014 a0004c0017 a0004c0024 a0004c0026 a0005c0019 a0005c0028 a0006c0021 a0006c0031 a0006c0059 a0009c0015 a0010c0044 a0011c0041 a0012c0032 a0014c0050 a0021c0061 a0024c0068	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(44): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0003t0002 a0001c0003t0009 a0001c0008t0002 a0001c0009t0001 a0001c0016t0001 a0001c0025t0001 a0001c0037t0001 a0001c0040t0001 a0002c0002t0002 a0002c0004t0001 a0002c0005t0001 a0002c0005t0002 a0002c0010t0002 a0002c0023t0001 a0002c0027t0001 a0002c0035t0001 a0002c0036t0001 a0003c0006t0001 a0003c0006t0002 a0003c0007t0002 a0003c0012t0002 a0003c0012t0010 a0003c0013t0001 a0003c0029t0001 a0003c0030t0001 a0003c0038t0001 a0003c0069t0002 a0004c0011t0001 a0004c0014t0002 a0004c0017t0002 a0004c0024t0001 a0004c0026t0002 a0005c0019t0002 a0005c0028t0001 a0006c0021t0002 a0006c0031t0001 a0006c0059t0002 a0009c0015t0002 a0010c0044t0002 a0011c0041t0001 a0012c0032t0007 a0014c0050t0002 a0021c0061t0002 a0024c0068t0002	a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0220 others(103): Show a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0220 a0001c0001t0002g0035 a0001c0001t0002g0151 a0001c0001t0002g0206 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0225 a0001c0001t0002g0279 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0296 a0001c0001t0008g0011 a0001c0003t0002g0217 a0001c0003t0002g0248 a0001c0003t0002g0267 a0001c0003t0002g0271 a0001c0003t0002g0277 a0001c0003t0009g0236 a0001c0008t0002g0116 a0001c0008t0002g0290 a0001c0008t0002g0295 a0001c0008t0002g0304 a0001c0009t0001g0002 a0001c0009t0001g0034 a0001c0009t0001g0041 a0001c0009t0001g0048 a0001c0009t0001g0219 a0001c0009t0001g0221 a0001c0009t0001g0243 a0001c0016t0001g0281 a0001c0016t0001g0282 a0001c0025t0001g0001 a0001c0025t0001g0045 a0001c0037t0001g0017 a0001c0040t0001g0019 a0002c0002t0002g0117 a0002c0002t0002g0218 a0002c0002t0002g0297 a0002c0002t0002g0298 a0002c0002t0002g0299 a0002c0002t0002g0300 a0002c0004t0001g0037 a0002c0004t0001g0046 a0002c0004t0001g0050 a0002c0004t0001g0053 a0002c0004t0001g0054 a0002c0004t0001g0055 a0002c0004t0001g0057 a0002c0004t0001g0058 a0002c0004t0001g0059 a0002c0004t0001g0061 a0002c0004t0001g0062 a0002c0004t0001g0063 a0002c0004t0001g0065 a0002c0005t0001g0149 a0002c0005t0002g0016 a0002c0005t0002g0021 a0002c0005t0002g0278 a0002c0010t0002g0268 a0002c0010t0002g0269 a0002c0023t0001g0013 a0002c0023t0001g0285 a0002c0027t0001g0309 a0002c0035t0001g0047 a0002c0036t0001g0028 a0003c0006t0001g0146 a0003c0006t0002g0036 a0003c0006t0002g0210 a0003c0006t0002g0215 a0003c0007t0002g0270 a0003c0007t0002g0273 a0003c0007t0002g0276 a0003c0012t0002g0152 a0003c0012t0002g0292 a0003c0012t0002g0305 a0003c0012t0010g0212 a0003c0013t0001g0003 a0003c0013t0001g0038 a0003c0013t0001g0051 a0003c0029t0001g0315 a0003c0030t0001g0284 a0003c0038t0001g0018 a0003c0069t0002g0200 a0004c0011t0001g0071 a0004c0014t0002g0023 a0004c0017t0002g0022 a0004c0024t0001g0049 a0004c0024t0001g0052 a0004c0026t0002g0118 a0005c0019t0002g0302 a0005c0028t0001g0234 a0006c0021t0002g0024 a0006c0021t0002g0235 a0006c0031t0001g0314 a0006c0059t0002g0258 a0009c0015t0002g0275 a0010c0044t0002g0274 a0011c0041t0001g0251 a0012c0032t0007g0222 a0014c0050t0002g0249 a0021c0061t0002g0303 a0024c0068t0002g0291	106	316	0.3354	-1	c.355 others(9): Show c.355+1185delA		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	3/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2039233	CT CT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02145.hp2 HG02280.hp2 others(6): Show HG01891.hp2 HG02145.hp2 HG02280.hp2 HG02809.hp2 HG02965.hp2 HG03831.hp1 NA18995.hp2 NA19030.hp2 NA19240.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0018	a0001c0001 a0002c0005 a0002c0023 others(3): Show a0001c0001 a0002c0005 a0002c0023 a0004c0014 a0004c0017 a0018c0039	a0001c0001t0001 a0002c0005t0001 a0002c0005t0014 others(4): Show a0001c0001t0001 a0002c0005t0001 a0002c0005t0014 a0002c0023t0001 a0004c0014t0001 a0004c0017t0002 a0018c0039t0001	a0001c0001t0001g0076 a0002c0005t0001g0068 a0002c0005t0001g0261 others(6): Show a0001c0001t0001g0076 a0002c0005t0001g0068 a0002c0005t0001g0261 a0002c0005t0014g0312 a0002c0023t0001g0013 a0002c0023t0001g0285 a0004c0014t0001g0199 a0004c0017t0002g0022 a0018c0039t0001g0080	9	316	0.0285	-1	c.356 others(8): Show c.356-220delT		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	3/33					INFO_REALIGN_3_PRIME	chr9	TogoVar
SMARCA2_chr9_2010347_2198620	2042657	AT AT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00733.hp2 HG00735.hp1 others(16): Show HG00423.hp2 HG00733.hp2 HG00735.hp1 HG01069.hp2 HG01081.hp2 HG01256.hp1 HG01257.hp1 HG01433.hp1 HG01975.hp1 HG02004.hp2 HG02015.hp2 HG02895.hp1 HG02896.hp2 HG03195.hp1 HG06807.hp2 NA18941.hp2 NA18950.hp2 NA18965.hp1 NA19057.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0009 a0016 a0020	a0001c0001 a0001c0003 a0001c0009 others(8): Show a0001c0001 a0001c0003 a0001c0009 a0001c0025 a0002c0002 a0003c0006 a0004c0017 a0006c0021 a0009c0015 a0016c0047 a0020c0057	a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 a0001c0009t0001 a0001c0025t0001 a0002c0002t0001 a0003c0006t0001 a0003c0006t0002 a0004c0017t0001 a0004c0017t0003 a0006c0021t0002 a0009c0015t0001 a0016c0047t0001 a0020c0057t0001	a0001c0001t0001g0102 a0001c0001t0001g0136 a0001c0001t0002g0206 others(16): Show a0001c0001t0001g0102 a0001c0001t0001g0136 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0003t0002g0271 a0001c0009t0001g0243 a0001c0025t0001g0001 a0002c0002t0001g0097 a0002c0002t0001g0100 a0003c0006t0001g0186 a0003c0006t0002g0215 a0004c0017t0001g0144 a0004c0017t0003g0131 a0006c0021t0002g0024 a0009c0015t0001g0237 a0016c0047t0001g0141 a0020c0057t0001g0171	19	316	0.0601	-1	c.790 others(9): Show c.790+2773delT		SMARCA2	ENSG00000080503.25	transcript	ENST00000349721.8	protein_coding	4/33					INFO_REALIGN_3_PRIME	chr9	TogoVar

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