view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNX29_chr16_11971734_12579287 | 12537984 | CA | C | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00438.hp2 others(97): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(80): Show | a0001c0001t0001g0141 a0001c0001t0002g0020 a0001c0001t0002g0081 others(97): Show |
100 | 176 | 0.5682 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12538083 | GC | G | intron_variant | MODIFIER | HG00733.hp1 HG01074.hp1 HG03490.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0021a0002c0005 | a0001c0001t0009a0001c0001t0030a0001c0001t0059others(3): Show | a0001c0001t0009g0090 a0001c0001t0030g0014 a0001c0001t0059g0040 others(3): Show |
6 | 176 | 0.0341 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12538120 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00438.hp1 others(101): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(84): Show | a0001c0001t0001g0127 a0001c0001t0002g0065 a0001c0001t0004g0078 others(101): Show |
104 | 176 | 0.5909 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12542723 | TA | T | intron_variant | MODIFIER | HG00438.hp1 HG01261.hp2 HG01981.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0006a0001c0001t0011a0001c0001t0031others(13): Show | a0001c0001t0006g0031 a0001c0001t0006g0064 a0001c0001t0011g0095 others(15): Show |
18 | 176 | 0.1023 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12542759 | CT | C | intron_variant | MODIFIER | HG00438.hp1 HG01981.hp1 HG02523.hp2 others(12): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0006a0001c0001t0011a0001c0001t0031others(11): Show | a0001c0001t0006g0031 a0001c0001t0006g0064 a0001c0001t0011g0095 others(12): Show |
15 | 176 | 0.0852 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12544488 | CG | C | intron_variant | MODIFIER | HG01261.hp2 HG02258.hp1 HG02615.hp2 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0024a0001c0002t0107a0001c0003t0016 | a0001c0002t0024g0050 a0001c0002t0107g0069 a0001c0003t0016g0029 |
3 | 176 | 0.0171 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12545328 | AG | A | intron_variant | MODIFIER | HG00140.hp1 HG00738.hp2 HG00741.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0110others(3): Show | a0001c0001t0001g0127 a0001c0001t0004g0078 a0001c0001t0004g0132 others(5): Show |
8 | 176 | 0.0455 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12550531 | CA | C | intron_variant | MODIFIER | HG00733.hp2 HG02630.hp1 HG02896.hp1 others(5): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0006a0001c0002t0005a0001c0004t0020others(4): Show | a0001c0001t0006g0064 a0001c0002t0005g0168 a0001c0004t0020g0038 others(5): Show |
8 | 176 | 0.0455 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12551227 | TC | T | intron_variant | MODIFIER | HG00642.hp2 HG00733.hp2 HG00738.hp1 others(27): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0012others(26): Show | a0001c0001t0002g0081 a0001c0001t0007g0175 a0001c0001t0012g0009 others(27): Show |
30 | 176 | 0.1705 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12553842 | TA | T | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0106a0001c0002t0109a0007c0016t0108 | a0001c0002t0106g0123 a0001c0002t0109g0036 a0007c0016t0108g0049 |
3 | 176 | 0.0171 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12555126 | GC | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(25): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0009others(15): Show | a0001c0001t0001g0108 a0001c0001t0001g0112 a0001c0001t0001g0141 others(25): Show |
28 | 176 | 0.1591 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12555490 | TG | T | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0106a0001c0002t0109a0007c0016t0108 | a0001c0002t0106g0123 a0001c0002t0109g0036 a0007c0016t0108g0049 |
3 | 176 | 0.0171 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12555733 | CT | C | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0106a0001c0002t0109a0007c0016t0108 | a0001c0002t0106g0123 a0001c0002t0109g0036 a0007c0016t0108g0049 |
3 | 176 | 0.0171 | -1 | c.231 others(11): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12559597 | TG | T | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0106a0001c0002t0109a0007c0016t0108 | a0001c0002t0106g0123 a0001c0002t0109g0036 a0007c0016t0108g0049 |
3 | 176 | 0.0171 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12560135 | TC | T | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(48): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0102a0001c0002t0003a0001c0002t0005others(38): Show | a0001c0001t0102g0001 a0001c0002t0003g0134 a0001c0002t0003g0152 others(48): Show |
51 | 176 | 0.2898 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12560154 | TA | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(140): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(101): Show | a0001c0001t0001g0108 a0001c0001t0001g0112 a0001c0001t0001g0127 others(140): Show |
143 | 176 | 0.8125 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12564054 | TG | T | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(34): Show |
a0001 | a0001c0002a0001c0004a0001c0015others(1): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0022others(25): Show | a0001c0002t0003g0051 a0001c0002t0003g0134 a0001c0002t0003g0152 others(34): Show |
37 | 176 | 0.2102 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12564934 | TA | T | intron_variant | MODIFIER | HG00673.hp1 HG00733.hp1 HG00738.hp1 others(24): Show |
a0001a0005a0006 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0009others(20): Show | a0001c0001t0002g0065 a0001c0001t0002g0169 a0001c0001t0007g0008 others(24): Show |
27 | 176 | 0.1534 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12565132 | AG | A | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(66): Show |
a0001a0003a0007others(1): Show | a0001c0001a0001c0002a0001c0004others(8): Show | a0001c0001t0001a0001c0001t0028a0001c0002t0003others(54): Show | a0001c0001t0001g0163 a0001c0001t0028g0122 a0001c0002t0003g0051 others(66): Show |
69 | 176 | 0.3921 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12565705 | CT | C | intron_variant | MODIFIER | HG02257.hp2 HG02486.hp2 HG02559.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0028a0001c0002t0070a0001c0004t0099others(1): Show | a0001c0001t0028g0122 a0001c0002t0070g0044 a0001c0004t0099g0125 others(1): Show |
4 | 176 | 0.0227 | -1 | c.231 others(10): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12569121 | GC | G | 3_prime_UTR_variant | MODIFIER | HG01884.hp1 HG01891.hp1 |
a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0016 a0001c0001t0013g0150 |
2 | 176 | 0.0114 | -1 | c.*49 others(5): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 21/21 | 493 | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12574802 | AG | A | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(49): Show |
a0001a0003 | a0001c0002a0001c0004a0001c0006others(4): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0022others(39): Show | a0001c0002t0003g0051 a0001c0002t0003g0134 a0001c0002t0003g0152 others(49): Show |
52 | 176 | 0.2955 | -1 | c.*61 others(6): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 516 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12575847 | TG | T | downstream_gene_variant | MODIFIER | HG03471.hp2 HG03579.hp1 |
a0001 | a0001c0002a0001c0025 | a0001c0002t0109a0001c0025t0096 | a0001c0002t0109g0036 a0001c0025t0096g0076 |
2 | 176 | 0.0114 | -1 | c.*72 others(6): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1561 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12575877 | TA | T | downstream_gene_variant | MODIFIER | HG01071.hp1 HG03834.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0003t0053 | a0001c0001t0004g0157 a0001c0003t0053g0131 |
2 | 176 | 0.0114 | -1 | c.*72 others(6): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1591 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12575878 | AT | A | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(19): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0014others(3): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0015others(8): Show | a0001c0001t0001g0108 a0001c0001t0001g0112 a0001c0001t0001g0127 others(19): Show |
22 | 176 | 0.1250 | -1 | c.*72 others(6): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1592 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12576187 | GT | G | downstream_gene_variant | MODIFIER | HG01496.hp1 HG02523.hp2 HG02965.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0101a0001c0003t0001others(2): Show | a0001c0001t0001g0163 a0001c0001t0101g0019 a0001c0003t0001g0158 others(2): Show |
5 | 176 | 0.0284 | -1 | c.*75 others(6): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1901 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12579093 | AT | A | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00438.hp2 HG00558.hp1 others(135): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(105): Show | a0001c0001t0002g0020 a0001c0001t0002g0065 a0001c0001t0002g0081 others(135): Show |
138 | 176 | 0.7841 | -1 | c.*10 others(7): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 4807 | chr16 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122771804 | CT | C | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02717.hp1 HG02895.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0012a0001c0001t0032others(4): Show | a0001c0001t0001g0033 a0001c0001t0012g0017 a0001c0001t0032g0243 others(17): Show |
21 | 372 | 0.0565 | -1 | c.-32 others(6): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 3275 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122780575 | TC | T | intron_variant | MODIFIER | HG00609.hp2 HG01070.hp1 HG01070.hp2 others(57): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(26): Show | a0001c0001t0001g0018 a0001c0001t0001g0089 a0001c0001t0003g0081 others(56): Show |
60 | 372 | 0.1613 | -1 | c.108 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122780576 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00558.hp2 others(79): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0012a0001c0001t0025others(8): Show | a0001c0001t0002g0001 a0001c0001t0002g0013 a0001c0001t0002g0014 others(70): Show |
82 | 372 | 0.2204 | -1 | c.108 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122783103 | AT | A | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp2 HG02647.hp2 others(5): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0005a0001c0001t0012a0001c0001t0029others(3): Show | a0001c0001t0005g0287 a0001c0001t0005g0288 a0001c0001t0012g0017 others(5): Show |
8 | 372 | 0.0215 | -1 | c.108 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122785502 | TC | T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(119): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0011others(31): Show | a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0141 others(116): Show |
122 | 372 | 0.3280 | -1 | c.109 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122792597 | CA | C | intron_variant | MODIFIER | HG01074.hp1 HG01243.hp1 HG01255.hp2 others(18): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0002a0001c0001t0004a0001c0001t0010others(7): Show | a0001c0001t0002g0332 a0001c0001t0004g0192 a0001c0001t0010g0253 others(18): Show |
21 | 372 | 0.0565 | -1 | c.109 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122801605 | TA | T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp2 others(101): Show |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(26): Show | a0001c0001t0002g0309 a0001c0001t0002g0338 a0001c0001t0003g0081 others(98): Show |
104 | 372 | 0.2796 | -1 | c.391 others(8): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122803313 | GT | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(265): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(54): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(260): Show |
268 | 372 | 0.7204 | -1 | c.502 others(8): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122804365 | CT | C | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG02074.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0305 a0001c0001t0002g0313 a0001c0001t0002g0314 others(3): Show |
6 | 372 | 0.0161 | -1 | c.643 others(8): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122805290 | CA | C | intron_variant | MODIFIER | HG01243.hp1 HG01255.hp2 HG01891.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0012a0001c0001t0032others(2): Show | a0001c0001t0004g0221 a0001c0001t0012g0283 a0001c0001t0032g0243 others(3): Show |
6 | 372 | 0.0161 | -1 | c.643 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122807267 | AG | A | intron_variant | MODIFIER | HG01884.hp1 HG02486.hp1 HG02615.hp2 others(2): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0015a0001c0006t0015 | a0001c0001t0015g0012 a0001c0001t0015g0270 a0001c0001t0015g0271 others(2): Show |
5 | 372 | 0.0134 | -1 | c.644 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 6/14 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122810397 | AT | A | intron_variant | MODIFIER | HG01074.hp1 HG01169.hp2 HG01515.hp1 others(17): Show |
a0001 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0050 a0001c0001t0001g0056 a0001c0001t0001g0067 others(17): Show |
20 | 372 | 0.0538 | -1 | c.722 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122810399 | TA | T | intron_variant | MODIFIER | HG00558.hp2 HG00738.hp1 HG01243.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0031a0001c0001t0060others(2): Show | a0001c0001t0002g0303 a0001c0001t0002g0309 a0001c0001t0002g0321 others(8): Show |
11 | 372 | 0.0296 | -1 | c.722 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122812348 | CT | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG01175.hp1 others(11): Show |
a0001 | a0001c0002 | a0001c0002t0009a0001c0002t0016a0001c0002t0024others(3): Show | a0001c0002t0009g0153 a0001c0002t0009g0155 a0001c0002t0009g0156 others(11): Show |
14 | 372 | 0.0376 | -1 | c.723 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122813767 | CT | C | intron_variant | MODIFIER | HG00597.hp2 HG01106.hp1 HG01175.hp2 others(20): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(6): Show | a0001c0001t0001g0040 a0001c0001t0001g0046 a0001c0001t0001g0047 others(20): Show |
23 | 372 | 0.0618 | -1 | c.723 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122817526 | AT | A | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(130): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(16): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(128): Show |
133 | 372 | 0.3575 | -1 | c.100 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 10/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122821454 | TC | T | intron_variant | MODIFIER | HG01243.hp1 HG01255.hp2 NA19056.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0012a0001c0001t0060 | a0001c0001t0002g0344 a0001c0001t0012g0283 a0001c0001t0060g0284 |
3 | 372 | 0.0081 | -1 | c.121 others(10): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122821925 | AG | A | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(130): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(16): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(128): Show |
133 | 372 | 0.3575 | -1 | c.121 others(10): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122823352 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(273): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(58): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(268): Show |
276 | 372 | 0.7419 | -1 | c.121 others(10): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122824147 | AG | A | intron_variant | MODIFIER | HG00597.hp2 HG02135.hp2 NA18747.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(1): Show | a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0005g0107 others(3): Show |
6 | 372 | 0.0161 | -1 | c.121 others(10): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | chr5 | TogoVar | |||||||
SNX2_chr5_122770080_122839543 | 122824201 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00438.hp1 others(218): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(34): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(208): Show |
221 | 372 | 0.5941 | -1 | c.121 others(10): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122827821 | GT | G | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(115): Show |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0003a0001c0001t0004a0001c0001t0011others(30): Show | a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0141 others(112): Show |
118 | 372 | 0.3172 | -1 | c.150 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNX2_chr5_122770080_122839543 | 122828029 | TA | T | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00544.hp1 others(135): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0003 | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(18): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(133): Show |
138 | 372 | 0.3710 | -1 | c.150 others(9): Show |
SNX2 | ENSG00000205302.7 | transcript | ENST00000379516.7 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr5 | TogoVar |