view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SOD2_chr6_159664069_159698241 | 159693328 | GC | G | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00733.hp1 HG00733.hp2 others(58): Show |
a0002 | a0002c0002 | a0002c0002t0003a0002c0002t0004a0002c0002t0006others(15): Show | a0002c0002t0003g0003 a0002c0002t0003g0021 a0002c0002t0003g0025 others(29): Show |
61 | 364 | 0.1676 | -1 | c.-16 others(5): Show |
SOD2 | ENSG00000291237.1 | transcript | ENST00000538183.7 | protein_coding | 88 | chr6 | TogoVar | |||||||
SOD2_chr6_159664069_159698241 | 159694761 | AT | A | upstream_gene_variant | MODIFIER | HG00423.hp1 HG00621.hp2 HG01884.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0015others(3): Show | a0001c0001t0002g0002 a0001c0001t0002g0117 a0001c0001t0002g0119 others(8): Show |
17 | 364 | 0.0467 | -1 | c.-15 others(6): Show |
SOD2 | ENSG00000291237.1 | transcript | ENST00000538183.7 | protein_coding | 1521 | chr6 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24793388 | GA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(440): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0005others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(121): Show |
443 | 466 | 0.9506 | -1 | c.-22 others(6): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 2184 | chr4 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24796435 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00741.hp2 HG01123.hp1 others(35): Show |
a0001a0006 | a0001c0001a0006c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0006 a0001c0001t0001g0058 a0001c0001t0002g0059 others(10): Show |
38 | 466 | 0.0816 | -1 | c.-17 others(8): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SOD3_chr4_24790573_24805842 | 24796622 | AT | A | intron_variant | MODIFIER | HG00733.hp1 HG00733.hp2 HG01069.hp1 others(9): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0014 a0002c0002t0002g0028 |
12 | 466 | 0.0258 | -1 | c.-17 others(8): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SOD3_chr4_24790573_24805842 | 24801106 | TA | T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(144): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0003a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(6): Show | a0001c0001t0001g0004 a0001c0001t0002g0001 a0001c0001t0002g0019 others(30): Show |
147 | 466 | 0.3155 | -1 | c.*86 others(5): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 265 | chr4 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24802272 | GA | G | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00423.hp2 HG00642.hp2 others(99): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0005others(1): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(4): Show | a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0027 others(20): Show |
102 | 466 | 0.2189 | -1 | c.*20 others(6): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 1431 | chr4 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24803189 | AT | A | downstream_gene_variant | MODIFIER | HG00597.hp1 HG01123.hp2 HG01168.hp2 others(31): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0002c0002t0002 | a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0041 others(8): Show |
34 | 466 | 0.0730 | -1 | c.*29 others(6): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 2348 | chr4 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24804486 | CA | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00423.hp2 others(104): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 others(45): Show |
107 | 466 | 0.2296 | -1 | c.*42 others(6): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 3645 | chr4 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36775895 | CA | C | downstream_gene_variant | MODIFIER | HG01168.hp2 HG02717.hp1 HG02809.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0024a0001c0002t0003others(1): Show | a0001c0001t0001g0141 a0001c0001t0024g0003 a0001c0002t0003g0129 others(3): Show |
6 | 282 | 0.0213 | -1 | c.*10 others(7): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1551 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36777132 | CT | C | downstream_gene_variant | MODIFIER | HG00738.hp1 HG01167.hp1 HG01169.hp1 others(10): Show |
a0001a0002a0006 | a0001c0002a0002c0004a0002c0020others(2): Show | a0001c0002t0015a0001c0002t0027a0002c0004t0009others(4): Show | a0001c0002t0015g0038 a0001c0002t0015g0039 a0001c0002t0027g0059 others(10): Show |
13 | 282 | 0.0461 | -1 | c.*93 others(6): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 314 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36788200 | CA | C | intron_variant | MODIFIER | HG00323.hp1 HG00639.hp2 HG00642.hp1 others(38): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0026 a0001c0001t0001g0132 a0001c0001t0002g0120 others(38): Show |
41 | 282 | 0.1454 | -1 | c.483 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 14/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36790428 | CT | C | intron_variant | MODIFIER | HG00280.hp1 HG00673.hp2 HG00733.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0020a0001c0001t0049others(5): Show | a0001c0001t0001g0019 a0001c0001t0001g0113 a0001c0001t0001g0132 others(26): Show |
29 | 282 | 0.1028 | -1 | c.483 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 14/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36798072 | AT | A | intron_variant | MODIFIER | HG01099.hp2 HG01358.hp1 HG01975.hp1 others(8): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(4): Show | a0001c0001t0001g0026 a0001c0001t0001g0163 a0001c0001t0002g0156 others(8): Show |
11 | 282 | 0.0390 | -1 | c.334 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 11/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36800757 | GA | G | intron_variant | MODIFIER | HG00280.hp1 HG00544.hp2 HG00621.hp1 others(54): Show |
a0001 | a0001c0001a0001c0003a0001c0007 | a0001c0001t0001a0001c0001t0020a0001c0001t0040others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0100 others(54): Show |
57 | 282 | 0.2021 | -1 | c.333 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 11/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36803956 | CA | C | intron_variant | MODIFIER | HG01081.hp2 HG01109.hp1 HG01123.hp2 others(17): Show |
a0001a0004a0008 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0008others(5): Show | a0001c0001t0001g0048 a0001c0001t0001g0220 a0001c0001t0001g0259 others(17): Show |
20 | 282 | 0.0709 | -1 | c.308 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 10/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36807865 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00639.hp1 others(48): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0004others(3): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(17): Show | a0001c0001t0001g0104 a0001c0001t0001g0117 a0001c0001t0001g0121 others(48): Show |
51 | 282 | 0.1809 | -1 | c.281 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 8/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36809578 | CT | C | intron_variant | MODIFIER | HG00323.hp2 HG01074.hp2 HG01167.hp2 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(6): Show | a0001c0001t0001g0159 a0001c0001t0001g0174 a0001c0001t0001g0196 others(11): Show |
14 | 282 | 0.0497 | -1 | c.258 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 7/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36817266 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(126): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0048 others(126): Show |
129 | 282 | 0.4575 | -1 | c.113 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 4/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36817487 | TA | T | intron_variant | MODIFIER | HG00621.hp1 HG00621.hp2 HG01169.hp1 others(13): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0019others(5): Show | a0001c0001t0001g0103 a0001c0001t0001g0107 a0001c0001t0001g0108 others(13): Show |
16 | 282 | 0.0567 | -1 | c.107 others(8): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36818717 | TA | T | intron_variant | MODIFIER | HG02818.hp2 HG02896.hp1 HG02897.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0017a0001c0001t0023a0001c0002t0015 | a0001c0001t0017g0241 a0001c0001t0017g0243 a0001c0001t0023g0242 others(1): Show |
4 | 282 | 0.0142 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36819610 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(218): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(58): Show | a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0026 others(218): Show |
221 | 282 | 0.7837 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36821181 | AT | A | intron_variant | MODIFIER | HG02257.hp2 HG02280.hp2 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0072 a0001c0001t0013g0246 a0001c0001t0013g0268 |
3 | 282 | 0.0106 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36822759 | CT | C | intron_variant | MODIFIER | HG00642.hp2 HG00738.hp1 HG01167.hp1 others(19): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0014others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(7): Show | a0001c0001t0001g0250 a0001c0001t0002g0109 a0001c0001t0013g0072 others(19): Show |
22 | 282 | 0.0780 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36826350 | TC | T | intron_variant | MODIFIER | HG00733.hp2 HG01361.hp1 HG01361.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0019a0001c0001t0026others(3): Show | a0001c0001t0001g0045 a0001c0001t0019g0244 a0001c0001t0026g0248 others(7): Show |
10 | 282 | 0.0355 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36827357 | CT | C | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp1 HG03130.hp2 others(6): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0017others(4): Show | a0001c0001t0001g0159 a0001c0001t0001g0190 a0001c0001t0002g0219 others(6): Show |
9 | 282 | 0.0319 | -1 | c.107 others(10): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36829513 | CT | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00544.hp1 others(68): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(22): Show | a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0001g0142 others(68): Show |
71 | 282 | 0.2518 | -1 | c.913 others(8): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 2/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36834162 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00639.hp2 others(51): Show |
a0001 | a0001c0001a0001c0002a0001c0009others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(11): Show | a0001c0001t0001g0026 a0001c0001t0001g0159 a0001c0001t0003g0036 others(51): Show |
54 | 282 | 0.1915 | -1 | c.913 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 2/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36836341 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(79): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0003a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0100 others(79): Show |
82 | 282 | 0.2908 | -1 | c.912 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 2/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36838974 | GA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00639.hp2 others(56): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0041a0001c0002t0001others(10): Show | a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 others(56): Show |
59 | 282 | 0.2092 | -1 | c.912 others(8): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 2/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36840520 | AG | A | intron_variant | MODIFIER | HG02572.hp1 HG02630.hp2 HG03486.hp1 others(1): Show |
a0001 | a0001c0009 | a0001c0009t0001 | a0001c0009t0001g0144 a0001c0009t0001g0146 a0001c0009t0001g0162 others(1): Show |
4 | 282 | 0.0142 | -1 | c.688 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36841155 | CA | C | intron_variant | MODIFIER | HG01934.hp2 HG01981.hp1 HG02074.hp2 others(5): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0041a0003c0005t0007 | a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 others(5): Show |
8 | 282 | 0.0284 | -1 | c.688 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36845010 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00639.hp2 others(50): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0011others(2): Show | a0001c0001t0002a0001c0001t0013a0001c0002t0001others(10): Show | a0001c0001t0002g0120 a0001c0001t0013g0268 a0001c0002t0001g0069 others(50): Show |
53 | 282 | 0.1879 | -1 | c.688 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36847853 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(68): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0026 a0001c0001t0001g0190 a0001c0001t0001g0207 others(68): Show |
71 | 282 | 0.2518 | -1 | c.688 others(9): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36867716 | CG | C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00733.hp2 others(83): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(34): Show | a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0001g0045 others(83): Show |
86 | 282 | 0.3050 | -1 | c.-43 others(6): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 4179 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36867855 | CT | C | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01167.hp1 HG01257.hp1 others(8): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0017a0001c0001t0035others(5): Show | a0001c0001t0001g0178 a0001c0001t0001g0212 a0001c0001t0001g0273 others(8): Show |
11 | 282 | 0.0390 | -1 | c.-45 others(6): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 4318 | chr20 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127468145 | CA | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(210): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0004others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0147 a0001c0001t0001g0164 a0001c0001t0002g0020 others(154): Show |
213 | 346 | 0.6156 | -1 | c.*51 others(6): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4828 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127479015 | TA | T | intron_variant | MODIFIER | HG00323.hp1 HG00673.hp2 HG01070.hp1 others(28): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0213 others(26): Show |
31 | 346 | 0.0896 | -1 | c.155 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 5/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127481649 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(140): Show |
a0001a0004a0006 | a0001c0002a0001c0004a0001c0005others(6): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(12): Show | a0001c0002t0001g0001 a0001c0002t0001g0003 a0001c0002t0001g0007 others(93): Show |
143 | 346 | 0.4133 | -1 | c.155 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 5/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127485031 | GC | G | intron_variant | MODIFIER | HG02280.hp2 HG02486.hp2 HG02922.hp2 others(1): Show |
a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0024 a0001c0003t0002g0115 a0001c0003t0002g0141 |
4 | 346 | 0.0116 | -1 | c.148 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127491878 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00323.hp2 others(95): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0189 a0001c0001t0002g0134 a0001c0001t0002g0140 others(67): Show |
98 | 346 | 0.2832 | -1 | c.148 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127495088 | TA | T | intron_variant | MODIFIER | HG00280.hp1 HG00423.hp1 HG00438.hp1 others(101): Show |
a0001a0002a0003others(2): Show | a0001c0002a0001c0005a0001c0012others(6): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(9): Show | a0001c0002t0001g0003 a0001c0002t0001g0007 a0001c0002t0001g0008 others(69): Show |
104 | 346 | 0.3006 | -1 | c.148 others(11): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127495196 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp2 others(85): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0147 a0001c0001t0001g0155 a0001c0001t0002g0020 others(55): Show |
88 | 346 | 0.2543 | -1 | c.148 others(11): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127507075 | AC | A | intron_variant | MODIFIER | HG01081.hp1 HG01123.hp2 HG01358.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0002t0001g0007 others(5): Show |
11 | 346 | 0.0318 | -1 | c.148 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127507842 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(183): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0006 a0001c0001t0001g0148 a0001c0001t0001g0149 others(129): Show |
186 | 346 | 0.5376 | -1 | c.148 others(10): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 4/6 | chr6 | TogoVar | |||||||
SOGA3_chr6_127467974_127524335 | 127518613 | CA | C | 5_prime_UTR_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(152): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(12): Show | a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0011 others(100): Show |
155 | 346 | 0.4480 | -1 | c.-12 others(5): Show |
SOGA3 | ENSG00000214338.11 | transcript | ENST00000525778.6 | protein_coding | 1/7 | 2000 | chr6 | TogoVar | ||||||
SOHLH1_chr9_135688407_135704481 | 135688580 | AG | A | downstream_gene_variant | MODIFIER | HG01496.hp2 HG02451.hp1 HG02723.hp2 others(1): Show |
a0001a0002a0011 | a0001c0001a0002c0002a0002c0010others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0010t0001others(1): Show | a0001c0001t0001g0002 a0002c0002t0001g0069 a0002c0010t0001g0028 others(1): Show |
4 | 418 | 0.0096 | -1 | c.*50 others(6): Show |
SOHLH1 | ENSG00000165643.11 | transcript | ENST00000425225.2 | protein_coding | 4826 | chr9 | TogoVar | |||||||
SOHLH1_chr9_135688407_135704481 | 135690241 | TA | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(361): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0006a0001c0011others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0006t0001others(18): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(58): Show |
364 | 418 | 0.8708 | -1 | c.*33 others(6): Show |
SOHLH1 | ENSG00000165643.11 | transcript | ENST00000425225.2 | protein_coding | 3165 | chr9 | TogoVar | |||||||
SOHLH1_chr9_135688407_135704481 | 135696254 | AC | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(83): Show |
a0001a0006a0008 | a0001c0001a0001c0012a0001c0013others(2): Show | a0001c0001t0001a0001c0012t0001a0001c0013t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0016 others(10): Show |
86 | 418 | 0.2057 | -1 | c.661 others(8): Show |
SOHLH1 | ENSG00000165643.11 | transcript | ENST00000425225.2 | protein_coding | 5/7 | chr9 | TogoVar | |||||||
SOHLH1_chr9_135688407_135704481 | 135697437 | CA | C | intron_variant | MODIFIER | NA18967.hp2 NA18970.hp1 NA19004.hp2 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0012 | 5 | 418 | 0.0120 | -1 | c.467 others(7): Show |
SOHLH1 | ENSG00000165643.11 | transcript | ENST00000425225.2 | protein_coding | 4/7 | chr9 | TogoVar |