Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PITPNC1_chr17_67372281_67702256	67490112	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01074.hp2 HG01192.hp2 others(13): Show HG00639.hp1 HG01074.hp2 HG01192.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG02004.hp1 HG02074.hp1 HG02148.hp1 HG02809.hp1 HG02922.hp1 HG03579.hp1 NA18969.hp1 NA18975.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0016 a0001c0001t0024 a0001c0001t0068 a0001c0001t0071 a0001c0001t0074	a0001c0001t0001g0132 a0001c0001t0001g0210 a0001c0001t0002g0003 others(13): Show a0001c0001t0001g0132 a0001c0001t0001g0210 a0001c0001t0002g0003 a0001c0001t0002g0102 a0001c0001t0003g0006 a0001c0001t0003g0014 a0001c0001t0003g0030 a0001c0001t0003g0033 a0001c0001t0003g0043 a0001c0001t0004g0186 a0001c0001t0016g0040 a0001c0001t0016g0041 a0001c0001t0024g0109 a0001c0001t0068g0045 a0001c0001t0071g0069 a0001c0001t0074g0066	16	218	0.0734	-10	c.49- others(27): Show c.49-42650_49-42641delGTGTGTGTGT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67494175	CTTTCTTT others(3): Show CTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01517.hp2 HG01516.hp2 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0145 a0001c0001t0011g0146 a0001c0001t0011g0145 a0001c0001t0011g0146	2	218	0.0092	-10	c.49- others(27): Show c.49-38615_49-38606delTTCTTTCTTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67495037	GTTGTTTT others(3): Show GTTGTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01175.hp2 HG03041.hp1 others(1): Show HG01071.hp2 HG01175.hp2 HG03041.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0012 a0001c0001t0013 others(1): Show a0001c0001t0006 a0001c0001t0012 a0001c0001t0013 a0001c0001t0070	a0001c0001t0006g0176 a0001c0001t0012g0004 a0001c0001t0013g0083 others(1): Show a0001c0001t0006g0176 a0001c0001t0012g0004 a0001c0001t0013g0083 a0001c0001t0070g0032	4	218	0.0184	-10	c.49- others(27): Show c.49-37762_49-37753delGTTTTTTTTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67495042	TTTTTTTT others(3): Show TTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02647.hp1 NA18956.hp2 HG02486.hp1 HG02647.hp1 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0019 a0001c0001t0028 a0001c0001t0010 a0001c0001t0019 a0001c0001t0028	a0001c0001t0010g0167 a0001c0001t0019g0048 a0001c0001t0028g0070 a0001c0001t0010g0167 a0001c0001t0019g0048 a0001c0001t0028g0070	3	218	0.0138	-10	c.49- others(27): Show c.49-37750_49-37741delGTTTTTTTTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67502744	CATTGTAT others(3): Show CATTGTATTGT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp2 HG01928.hp1 others(11): Show HG00423.hp2 HG00544.hp2 HG01928.hp1 HG01928.hp2 HG02074.hp1 HG02622.hp2 HG02738.hp2 HG03453.hp2 HG03831.hp2 HG03942.hp1 HG04199.hp1 NA18906.hp2 NA18975.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013 a0001c0001t0016 a0001c0001t0018 a0001c0001t0030 a0001c0001t0039 a0001c0001t0068	a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0002g0117 others(11): Show a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0002g0117 a0001c0001t0002g0150 a0001c0001t0003g0014 a0001c0001t0003g0036 a0001c0001t0003g0043 a0001c0001t0004g0191 a0001c0001t0013g0121 a0001c0001t0016g0044 a0001c0001t0018g0049 a0001c0001t0030g0058 a0001c0001t0039g0175 a0001c0001t0068g0045	14	218	0.0642	-10	c.49- others(27): Show c.49-30004_49-29995delGTATTGTATT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67534643	AAAAAGAA others(3): Show AAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03098.hp1 HG03041.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0005 a0001c0001t0006	a0001c0001t0005g0110 a0001c0001t0006g0176 a0001c0001t0005g0110 a0001c0001t0006g0176	2	218	0.0092	-10	c.197 others(27): Show c.197+1711_197+1720delAAGAAAAGAA	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67540069	CATTTTAT others(3): Show CATTTTATTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG00741.hp1 others(43): Show HG00140.hp1 HG00323.hp2 HG00741.hp1 HG01071.hp2 HG01169.hp1 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01993.hp2 HG02074.hp1 HG02257.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp2 HG02818.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03471.hp1 HG03516.hp2 HG03942.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18948.hp1 NA19005.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(31): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0031 a0001c0001t0032 a0001c0001t0034 a0001c0001t0041 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0056 a0001c0001t0057 a0001c0001t0059 a0001c0001t0061 a0001c0001t0065 a0001c0001t0070 a0001c0001t0076 a0001c0002t0018	a0001c0001t0001g0091 a0001c0001t0002g0102 a0001c0001t0002g0120 others(43): Show a0001c0001t0001g0091 a0001c0001t0002g0102 a0001c0001t0002g0120 a0001c0001t0003g0021 a0001c0001t0003g0043 a0001c0001t0005g0110 a0001c0001t0005g0169 a0001c0001t0006g0176 a0001c0001t0007g0103 a0001c0001t0007g0177 a0001c0001t0008g0179 a0001c0001t0009g0180 a0001c0001t0009g0194 a0001c0001t0009g0206 a0001c0001t0011g0145 a0001c0001t0011g0146 a0001c0001t0011g0165 a0001c0001t0013g0198 a0001c0001t0014g0019 a0001c0001t0014g0034 a0001c0001t0015g0012 a0001c0001t0018g0049 a0001c0001t0019g0048 a0001c0001t0020g0005 a0001c0001t0020g0126 a0001c0001t0022g0052 a0001c0001t0022g0061 a0001c0001t0024g0109 a0001c0001t0024g0174 a0001c0001t0025g0192 a0001c0001t0026g0203 a0001c0001t0031g0051 a0001c0001t0032g0050 a0001c0001t0034g0072 a0001c0001t0041g0215 a0001c0001t0043g0105 a0001c0001t0045g0108 a0001c0001t0046g0047 a0001c0001t0056g0092 a0001c0001t0057g0111 a0001c0001t0059g0098 a0001c0001t0061g0002 a0001c0001t0065g0035 a0001c0001t0070g0032 a0001c0001t0076g0065 a0001c0002t0018g0056	46	218	0.2110	-10	c.197 others(27): Show c.197+7154_197+7163delTATTTTATTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67575860	TTCCTTCT others(3): Show TTCCTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0110 a0001c0001t0005g0110	1	218	0.0046	-10	c.295 others(27): Show c.295-2324_295-2315delCCTTCTTTCT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67579614	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01074.hp2 HG00639.hp1 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0040 a0001c0001t0016g0041 a0001c0001t0016g0040 a0001c0001t0016g0041	2	218	0.0092	-10	c.366 others(27): Show c.366+1376_366+1385delTTTTTTTTTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67583887	GTGTGTGT others(3): Show GTGTGTGTGTT	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02738.hp2 HG01109.hp1 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0037 a0001c0001t0001 a0001c0001t0037	a0001c0001t0001g0160 a0001c0001t0037g0018 a0001c0001t0001g0160 a0001c0001t0037g0018	2	218	0.0092	-10	c.366 others(27): Show c.366+5640_366+5649delTTGTGTGTGT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67599001	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01243.hp1 HG02280.hp2 others(9): Show HG00140.hp1 HG01243.hp1 HG02280.hp2 HG02886.hp2 HG03195.hp2 HG03453.hp1 HG03579.hp1 NA18522.hp1 NA18906.hp1 NA18998.hp2 NA19030.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(8): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0014 a0001c0001t0019 a0001c0001t0023 a0001c0001t0031 a0001c0001t0045 a0001c0001t0071 a0001c0001t0076	a0001c0001t0001g0171 a0001c0001t0006g0076 a0001c0001t0007g0107 others(9): Show a0001c0001t0001g0171 a0001c0001t0006g0076 a0001c0001t0007g0107 a0001c0001t0008g0166 a0001c0001t0008g0173 a0001c0001t0014g0019 a0001c0001t0019g0101 a0001c0001t0023g0184 a0001c0001t0031g0051 a0001c0001t0045g0108 a0001c0001t0071g0069 a0001c0001t0076g0065	12	218	0.0551	-10	c.366 others(29): Show c.366+20769_366+20778delATATATATAT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67621180	CATTTTAT others(3): Show CATTTTATTTT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03453.hp2 HG03579.hp1 HG02723.hp1 HG03453.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0030 a0001c0001t0071 a0001c0001t0017 a0001c0001t0030 a0001c0001t0071	a0001c0001t0017g0054 a0001c0001t0030g0058 a0001c0001t0071g0069 a0001c0001t0017g0054 a0001c0001t0030g0058 a0001c0001t0071g0069	3	218	0.0138	-10	c.367 others(29): Show c.367-10926_367-10917delTTTTATTTTA	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67647463	GGTTTTTT others(3): Show GGTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01074.hp1 HG01361.hp2 others(5): Show HG00741.hp1 HG01074.hp1 HG01361.hp2 HG03942.hp2 NA18956.hp2 NA18975.hp2 NA19005.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0010 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0010 a0001c0001t0013 a0001c0001t0026 a0001c0001t0049 a0001c0001t0062	a0001c0001t0001g0209 a0001c0001t0008g0179 a0001c0001t0010g0093 others(5): Show a0001c0001t0001g0209 a0001c0001t0008g0179 a0001c0001t0010g0093 a0001c0001t0010g0167 a0001c0001t0013g0198 a0001c0001t0026g0203 a0001c0001t0049g0170 a0001c0001t0062g0039	8	218	0.0367	-10	c.462 others(29): Show c.462+15226_462+15235delGTTTTTTTTT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	6/8			chr17	TogoVar
PITPNM2_chr12_122978480_123156090	123067453	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0160 a0001c0001t0002g0160	1	230	0.0044	-10	c.-95 others(29): Show c.-95-32778_-95-32769delTGTGTGTGTG	PITPNM2	ENSG00000090975.14	transcript	ENST00000320201.10	protein_coding	2/25			chr12	TogoVar
PITPNM2_chr12_122978480_123156090	123128264	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00642.hp1 HG00673.hp2 others(31): Show HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00741.hp2 HG01175.hp2 HG01952.hp1 HG01975.hp2 HG01978.hp2 HG02040.hp1 HG02071.hp1 HG02129.hp1 HG02155.hp1 HG02258.hp2 HG02523.hp1 HG02683.hp2 HG02738.hp2 HG03017.hp2 HG03492.hp2 HG03688.hp2 HG03831.hp1 HG04204.hp1 HG04228.hp1 NA18941.hp2 NA18952.hp1 NA18953.hp2 NA18982.hp2 NA18993.hp1 NA18995.hp1 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19067.hp1 NA19082.hp1 NA19090.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0015 a0003c0024 a0001c0001 a0001c0015 a0003c0024	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0015t0002 a0003c0024t0002	a0001c0001t0001g0154 a0001c0001t0002g0136 a0001c0001t0002g0147 others(31): Show a0001c0001t0001g0154 a0001c0001t0002g0136 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0167 a0001c0001t0002g0169 a0001c0001t0002g0179 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0191 a0001c0001t0002g0195 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0003g0180 a0001c0001t0007g0192 a0001c0015t0002g0185 a0003c0024t0002g0198	34	230	0.1478	-10	c.-19 others(31): Show c.-199-17786_-199-17777delTTTTTTTTTT	PITPNM2	ENSG00000090975.14	transcript	ENST00000320201.10	protein_coding	1/25			chr12	TogoVar
PITPNM3_chr17_6446263_6561555	6453124	CCTCTCTC others(3): Show CCTCTCTCTCT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02630.hp2 HG03139.hp2 HG03471.hp1 others(1): Show HG02630.hp2 HG03139.hp2 HG03471.hp1 HG03540.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0026 a0001c0001 a0004c0026	a0001c0001t0015 a0004c0026t0049 a0001c0001t0015 a0004c0026t0049	a0001c0001t0015g0029 a0001c0001t0015g0112 a0001c0001t0015g0173 others(1): Show a0001c0001t0015g0029 a0001c0001t0015g0112 a0001c0001t0015g0173 a0004c0026t0049g0004	4	218	0.0184	-10	c.22 others(21): Show c.2204_*2213delAGAGAGAGAG	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	20/20	2204		chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6455647	CGGAGGGC others(3): Show CGGAGGGCAGG	C C	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG01099.hp1 HG01346.hp2 HG01943.hp1 others(2): Show HG01099.hp1 HG01346.hp2 HG01943.hp1 HG01993.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0021 a0001c0003t0017 a0001c0003t0030 others(1): Show a0001c0001t0021 a0001c0003t0017 a0001c0003t0030 a0001c0003t0077	a0001c0001t0021g0091 a0001c0003t0017g0067 a0001c0003t0030g0069 others(2): Show a0001c0001t0021g0091 a0001c0003t0017g0067 a0001c0003t0030g0069 a0001c0003t0030g0070 a0001c0003t0077g0090	5	218	0.0229	-10	c.262 others(24): Show c.2620-14_2620-5delCCTGCCCTCC	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	19/19			chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6481853	TAGAGAGA others(3): Show TAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00544.hp2 HG01167.hp2 others(6): Show HG00423.hp1 HG00544.hp2 HG01167.hp2 HG01943.hp2 HG02622.hp1 HG02647.hp1 HG03130.hp1 NA18970.hp2 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0002c0005	a0001c0001t0006 a0001c0001t0050 a0001c0001t0083 others(5): Show a0001c0001t0006 a0001c0001t0050 a0001c0001t0083 a0001c0003t0057 a0001c0003t0076 a0001c0007t0027 a0001c0007t0035 a0002c0005t0017	a0001c0001t0006g0035 a0001c0001t0006g0128 a0001c0001t0050g0065 others(6): Show a0001c0001t0006g0035 a0001c0001t0006g0128 a0001c0001t0050g0065 a0001c0001t0083g0136 a0001c0003t0057g0188 a0001c0003t0076g0191 a0001c0007t0027g0034 a0001c0007t0035g0072 a0002c0005t0017g0181	9	218	0.0413	-10	c.587 others(27): Show c.587+1654_587+1663delCTCTCTCTCT	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	6/19			chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6481898	AGAATACA others(3): Show AGAATACATAG	A A	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0014 a0002c0004t0014	a0002c0004t0014g0160 a0002c0004t0014g0160	1	218	0.0046	-10	c.587 others(27): Show c.587+1609_587+1618delCTATGTATTC	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	6/19			chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6481985	CCTCTCTC others(3): Show CCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01884.hp1 HG02280.hp1 others(9): Show HG00673.hp1 HG01884.hp1 HG02280.hp1 HG02647.hp1 HG03130.hp2 HG03491.hp2 HG03669.hp2 NA18612.hp2 NA18944.hp2 NA18964.hp2 NA19007.hp2 NA19088.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0007 others(2): Show a0001c0001 a0001c0003 a0001c0007 a0002c0009 a0003c0008	a0001c0001t0001 a0001c0001t0010 a0001c0001t0085 others(6): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0085 a0001c0001t0096 a0001c0003t0032 a0001c0007t0006 a0001c0007t0027 a0002c0009t0006 a0003c0008t0005	a0001c0001t0001g0044 a0001c0001t0001g0097 a0001c0001t0001g0099 others(9): Show a0001c0001t0001g0044 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0142 a0001c0001t0010g0147 a0001c0001t0085g0076 a0001c0001t0096g0208 a0001c0003t0032g0010 a0001c0007t0006g0025 a0001c0007t0027g0034 a0002c0009t0006g0113 a0003c0008t0005g0176	12	218	0.0551	-10	c.587 others(27): Show c.587+1522_587+1531delAGAGAGAGAG	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	6/19			chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6482036	GTCTGTCT others(3): Show GTCTGTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG03139.hp2 NA18906.hp2 HG00423.hp1 HG03139.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0015 a0001c0001t0026 a0001c0003t0057 a0001c0001t0015 a0001c0001t0026 a0001c0003t0057	a0001c0001t0015g0112 a0001c0001t0026g0148 a0001c0003t0057g0188 a0001c0001t0015g0112 a0001c0001t0026g0148 a0001c0003t0057g0188	3	218	0.0138	-10	c.587 others(27): Show c.587+1471_587+1480delGAGAGACAGA	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding	6/19			chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6560628	TCGTAGTC others(3): Show TCGTAGTCCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0033 a0001c0003t0033	a0001c0003t0033g0030 a0001c0003t0033g0030	1	218	0.0046	-10	c.-42 others(21): Show c.-4232_-4223delGAGGACTACG	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding		4074		chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6560785	CTCCTCCT others(3): Show CTCCTCCTTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	218	0.0046	-10	c.-43 others(21): Show c.-4389_-4380delAGAAGGAGGA	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding		4231		chr17	TogoVar
PITPNM3_chr17_6446263_6561555	6561344	CTCTTCCT others(3): Show CTCTTCCTTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0136 a0001c0001t0083g0136	1	218	0.0046	-10	c.-49 others(21): Show c.-4948_-4939delAGAAGGAAGA	PITPNM3	ENSG00000091622.16	transcript	ENST00000262483.13	protein_coding		4790		chr17	TogoVar
PITRM1_chr10_3132728_3177782	3136588	CGCCTGCA others(3): Show CGCCTGCATGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0003 a0001c0002t0001g0003	1	446	0.0022	-10	c.14 others(21): Show c.1433_*1442delACATGCAGGC	PITRM1	ENSG00000107959.17	transcript	ENST00000224949.9	protein_coding		1139		chr10	TogoVar
PITRM1_chr10_3132728_3177782	3168914	CTACACAC others(3): Show CTACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02970.hp1 HG01243.hp1 HG02970.hp1	a0006 a0006	a0006c0017 a0006c0060 a0006c0017 a0006c0060	a0006c0017t0001 a0006c0060t0001 a0006c0017t0001 a0006c0060t0001	a0006c0017t0001g0335 a0006c0060t0001g0333 a0006c0017t0001g0335 a0006c0060t0001g0333	2	446	0.0045	-10	c.159 others(27): Show c.159+1180_159+1189delTGTGTGTGTA	PITRM1	ENSG00000107959.17	transcript	ENST00000224949.9	protein_coding	2/26			chr10	TogoVar
PITRM1_chr10_3132728_3177782	3168915	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02083.hp1 HG02132.hp1 others(24): Show HG01167.hp1 HG02083.hp1 HG02132.hp1 HG03225.hp2 HG04115.hp2 NA18943.hp2 NA18944.hp1 NA18952.hp1 NA18957.hp1 NA18959.hp1 NA18961.hp1 NA18963.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18975.hp2 NA18980.hp2 NA18990.hp2 NA18992.hp1 NA19043.hp2 NA19060.hp2 NA19064.hp2 NA19066.hp2 NA19077.hp2 NA19080.hp1 NA19240.hp1 NA20129.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0009 a0017	a0001c0005 a0002c0003 a0002c0004 others(5): Show a0001c0005 a0002c0003 a0002c0004 a0004c0006 a0005c0007 a0005c0038 a0009c0034 a0017c0043	a0001c0005t0002 a0002c0003t0001 a0002c0004t0001 others(5): Show a0001c0005t0002 a0002c0003t0001 a0002c0004t0001 a0004c0006t0001 a0005c0007t0001 a0005c0038t0001 a0009c0034t0001 a0017c0043t0001	a0001c0005t0002g0298 a0002c0003t0001g0216 a0002c0004t0001g0215 others(19): Show a0001c0005t0002g0298 a0002c0003t0001g0216 a0002c0004t0001g0215 a0004c0006t0001g0013 a0004c0006t0001g0014 a0004c0006t0001g0046 a0004c0006t0001g0310 a0004c0006t0001g0311 a0004c0006t0001g0312 a0004c0006t0001g0313 a0004c0006t0001g0314 a0004c0006t0001g0319 a0004c0006t0001g0320 a0004c0006t0001g0321 a0004c0006t0001g0322 a0004c0006t0001g0323 a0004c0006t0001g0325 a0004c0006t0001g0327 a0005c0007t0001g0329 a0005c0038t0001g0324 a0009c0034t0001g0145 a0017c0043t0001g0330	27	446	0.0605	-10	c.159 others(27): Show c.159+1179_159+1188delGTGTGTGTGT	PITRM1	ENSG00000107959.17	transcript	ENST00000224949.9	protein_coding	2/26			chr10	TogoVar
PITRM1_chr10_3132728_3177782	3171146	TTAAAAAA others(3): Show TTAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp1 others(56): Show HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01433.hp2 HG01496.hp1 HG01934.hp1 HG01952.hp2 HG02040.hp1 HG02040.hp2 HG02132.hp2 HG02165.hp2 HG02293.hp2 HG02523.hp2 HG02735.hp1 HG02738.hp1 HG02886.hp2 HG03239.hp2 HG03654.hp1 HG03654.hp2 NA18747.hp2 NA18951.hp1 NA18953.hp2 NA18956.hp2 NA18957.hp2 NA18967.hp1 NA18968.hp2 NA18984.hp2 NA18986.hp2 NA18989.hp2 NA18998.hp1 NA18999.hp1 NA19002.hp1 NA19005.hp1 NA19012.hp2 NA19066.hp1 NA19070.hp1 NA19074.hp1 NA19075.hp1 NA19079.hp1 NA19083.hp1 NA19084.hp2 NA19087.hp2 NA19089.hp1 NA19240.hp2 NA20300.hp1 NA20805.hp2	a0001 a0011 a0001 a0011	a0001c0002 a0001c0013 a0001c0030 others(5): Show a0001c0002 a0001c0013 a0001c0030 a0001c0047 a0001c0051 a0001c0053 a0001c0057 a0011c0027	a0001c0002t0001 a0001c0013t0001 a0001c0030t0001 others(5): Show a0001c0002t0001 a0001c0013t0001 a0001c0030t0001 a0001c0047t0001 a0001c0051t0001 a0001c0053t0001 a0001c0057t0001 a0011c0027t0003	a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 others(30): Show a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0247 a0001c0002t0001g0255 a0001c0002t0001g0256 a0001c0002t0001g0257 a0001c0002t0001g0259 a0001c0002t0001g0262 a0001c0002t0001g0263 a0001c0002t0001g0264 a0001c0002t0001g0265 a0001c0002t0001g0266 a0001c0002t0001g0267 a0001c0002t0001g0268 a0001c0002t0001g0269 a0001c0002t0001g0270 a0001c0002t0001g0272 a0001c0002t0001g0274 a0001c0013t0001g0258 a0001c0013t0001g0260 a0001c0013t0001g0271 a0001c0030t0001g0038 a0001c0047t0001g0261 a0001c0051t0001g0273 a0001c0053t0001g0072 a0001c0057t0001g0071 a0011c0027t0003g0138	59	446	0.1323	-10	c.57- others(23): Show c.57-950_57-941delTTTTTTTTTA	PITRM1	ENSG00000107959.17	transcript	ENST00000224949.9	protein_coding	1/26			chr10	TogoVar
PITRM1_chr10_3132728_3177782	3171147	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02056.hp2 HG02083.hp2 others(9): Show HG00544.hp2 HG02056.hp2 HG02083.hp2 HG02109.hp2 NA18946.hp1 NA18971.hp1 NA18992.hp2 NA19001.hp2 NA19005.hp2 NA19062.hp1 NA19085.hp2 NA19090.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0001c0052 a0005c0042 a0001c0002 a0001c0052 a0005c0042	a0001c0002t0001 a0001c0052t0001 a0005c0042t0001 a0001c0002t0001 a0001c0052t0001 a0005c0042t0001	a0001c0002t0001g0007 a0001c0002t0001g0031 a0001c0002t0001g0246 others(5): Show a0001c0002t0001g0007 a0001c0002t0001g0031 a0001c0002t0001g0246 a0001c0002t0001g0249 a0001c0002t0001g0250 a0001c0002t0001g0251 a0001c0052t0001g0248 a0005c0042t0001g0150	12	446	0.0269	-10	c.57- others(23): Show c.57-951_57-942delTTTTTTTTTT	PITRM1	ENSG00000107959.17	transcript	ENST00000224949.9	protein_coding	1/26			chr10	TogoVar
PITX2_chr4_110612423_110628077	110613187	AAAACCAA others(3): Show AAAACCAAACC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00738.hp2 HG01109.hp1 others(23): Show HG00639.hp2 HG00738.hp2 HG01109.hp1 HG01891.hp1 HG01975.hp2 HG02145.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03209.hp2 HG03225.hp2 HG03486.hp1 HG03516.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010	a0001c0001t0002g0022 a0001c0001t0003g0004 a0001c0001t0003g0017 others(2): Show a0001c0001t0002g0022 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0003g0037 a0001c0001t0010g0023	26	422	0.0616	-10	c.49 others(21): Show c.4928_*4937delGGTTTGGTTT	PITX2	ENSG00000164093.18	transcript	ENST00000644743.1	protein_coding		4235		chr4	TogoVar
PIWIL1_chr12_130332887_130377637	130372597	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00408.hp1 others(75): Show HG00099.hp2 HG00323.hp2 HG00408.hp1 HG01069.hp1 HG01071.hp1 HG01167.hp1 HG01169.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp1 HG01884.hp2 HG01934.hp1 HG02004.hp1 HG02027.hp2 HG02083.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02976.hp2 HG03130.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03831.hp2 HG03942.hp2 HG04199.hp1 NA18612.hp2 NA18906.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp2 NA18945.hp1 NA18948.hp1 NA18952.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18986.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp2 NA18998.hp2 NA19005.hp1 NA19007.hp2 NA19011.hp1 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19064.hp1 NA19066.hp1 NA19070.hp2 NA19077.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp2	a0001 a0004 a0007 others(1): Show a0001 a0004 a0007 a0008	a0001c0001 a0001c0002 a0001c0013 others(3): Show a0001c0001 a0001c0002 a0001c0013 a0004c0006 a0007c0011 a0008c0012	a0001c0001t0002 a0001c0001t0017 a0001c0001t0022 others(13): Show a0001c0001t0002 a0001c0001t0017 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0050 a0001c0002t0002 a0001c0002t0017 a0001c0002t0022 a0001c0002t0025 a0001c0002t0034 a0001c0002t0052 a0001c0013t0002 a0004c0006t0002 a0007c0011t0002 a0008c0012t0002	a0001c0001t0002g0005 a0001c0001t0002g0009 a0001c0001t0002g0010 others(66): Show a0001c0001t0002g0005 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0014 a0001c0001t0002g0028 a0001c0001t0002g0032 a0001c0001t0002g0035 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0133 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0139 a0001c0001t0002g0141 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0158 a0001c0001t0002g0161 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0171 a0001c0001t0002g0177 a0001c0001t0002g0182 a0001c0001t0002g0199 a0001c0001t0002g0235 a0001c0001t0017g0016 a0001c0001t0017g0047 a0001c0001t0017g0321 a0001c0001t0017g0322 a0001c0001t0022g0007 a0001c0001t0022g0011 a0001c0001t0025g0114 a0001c0001t0026g0002 a0001c0001t0050g0255 a0001c0002t0002g0020 a0001c0002t0002g0024 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0055 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0063 a0001c0002t0002g0074 a0001c0002t0002g0084 a0001c0002t0002g0157 a0001c0002t0017g0176 a0001c0002t0022g0038 a0001c0002t0022g0243 a0001c0002t0025g0064 a0001c0002t0025g0079 a0001c0002t0034g0094 a0001c0002t0034g0095 a0001c0002t0052g0097 a0001c0013t0002g0138 a0004c0006t0002g0005 a0007c0011t0002g0010 a0008c0012t0002g0156	78	425	0.1835	-10	c.99 others(20): Show c.999_*1008delAAAAAAAAAA	PIWIL1	ENSG00000125207.7	transcript	ENST00000245255.7	protein_coding	21/21	999	INFO_REALIGN_3_PRIME	chr12	TogoVar
PIWIL2_chr8_22270316_22362568	22322580	TGTCCCGT others(3): Show TGTCCCGTCCC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01099.hp2 HG01167.hp1 others(12): Show HG00639.hp2 HG01099.hp2 HG01167.hp1 HG01169.hp1 HG01257.hp1 HG01258.hp2 HG01993.hp2 HG02145.hp2 HG02723.hp1 HG03486.hp1 HG03579.hp2 NA18942.hp1 NA18959.hp2 NA18974.hp2 NA18988.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0005 a0003c0002t0001 a0003c0002t0012 others(1): Show a0001c0001t0005 a0003c0002t0001 a0003c0002t0012 a0003c0002t0022	a0001c0001t0005g0006 a0001c0001t0005g0007 a0001c0001t0005g0008 others(12): Show a0001c0001t0005g0006 a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0011 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0014 a0001c0001t0005g0015 a0003c0002t0001g0019 a0003c0002t0012g0016 a0003c0002t0012g0017 a0003c0002t0012g0020 a0003c0002t0022g0018	15	296	0.0507	-10	c.240 others(29): Show c.2403+4310_2403+4319delCGTCCCGTCC	PIWIL2	ENSG00000197181.12	transcript	ENST00000356766.11	protein_coding	20/22		INFO_REALIGN_3_PRIME	chr8	TogoVar
PIWIL2_chr8_22270316_22362568	22351436	CATACATA others(3): Show CATACATATAT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03130.hp1 NA19056.hp1 others(2): Show HG02717.hp1 HG03130.hp1 NA19056.hp1 NA19056.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0001c0001t0006 a0002c0003t0003 a0001c0001t0003 a0001c0001t0006 a0002c0003t0003	a0001c0001t0003g0270 a0001c0001t0006g0021 a0001c0001t0006g0022 others(2): Show a0001c0001t0003g0270 a0001c0001t0006g0021 a0001c0001t0006g0022 a0002c0003t0003g0244 a0002c0003t0003g0245	5	296	0.0169	-10	c.240 others(29): Show c.2404-1519_2404-1510delCATATATATA	PIWIL2	ENSG00000197181.12	transcript	ENST00000356766.11	protein_coding	20/22		INFO_REALIGN_3_PRIME	chr8	TogoVar
PIWIL2_chr8_22270316_22362568	22351440	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02896.hp2 HG03098.hp2 others(1): Show HG02486.hp1 HG02896.hp2 HG03098.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0044 a0001c0001t0002g0090 a0001c0001t0002g0094 others(1): Show a0001c0001t0002g0044 a0001c0001t0002g0090 a0001c0001t0002g0094 a0001c0001t0008g0107	4	296	0.0135	-10	c.240 others(29): Show c.2404-1485_2404-1476delTATATATATA	PIWIL2	ENSG00000197181.12	transcript	ENST00000356766.11	protein_coding	20/22		INFO_REALIGN_3_PRIME	chr8	TogoVar
PIWIL2_chr8_22270316_22362568	22357784	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02615.hp1 HG02922.hp1 others(3): Show HG02109.hp1 HG02615.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 NA20129.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0007 a0004c0004t0009 a0001c0001t0007 a0004c0004t0009	a0001c0001t0007g0159 a0001c0001t0007g0160 a0001c0001t0007g0161 others(3): Show a0001c0001t0007g0159 a0001c0001t0007g0160 a0001c0001t0007g0161 a0001c0001t0007g0162 a0004c0004t0009g0174 a0004c0004t0009g0177	6	296	0.0203	-10	c.22 others(21): Show c.2280_*2289delTGTGTGTGTG	PIWIL2	ENSG00000197181.12	transcript	ENST00000356766.11	protein_coding		217		chr8	TogoVar
PIWIL3_chr22_24714034_24779720	24720259	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG03017.hp1 NA19043.hp2 others(1): Show HG00323.hp1 HG03017.hp1 NA19043.hp2 NA19075.hp2	a0002 a0003 a0010 a0002 a0003 a0010	a0002c0002 a0003c0003 a0010c0014 a0002c0002 a0003c0003 a0010c0014	a0002c0002t0002 a0003c0003t0002 a0010c0014t0008 a0002c0002t0002 a0003c0003t0002 a0010c0014t0008	a0002c0002t0002g0156 a0003c0003t0002g0037 a0003c0003t0002g0164 others(1): Show a0002c0002t0002g0156 a0003c0003t0002g0037 a0003c0003t0002g0164 a0010c0014t0008g0364	4	386	0.0104	-10	c.235 others(27): Show c.2358-374_2358-365delAAAAAAAAAA	PIWIL3	ENSG00000184571.14	transcript	ENST00000616349.5	protein_coding	19/20			chr22	TogoVar
PIWIL3_chr22_24714034_24779720	24744178	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0090 a0001c0001t0002g0090	1	386	0.0026	-10	c.144 others(29): Show c.1449+4719_1449+4728delTTTTTTTTTT	PIWIL3	ENSG00000184571.14	transcript	ENST00000616349.5	protein_coding	12/20			chr22	TogoVar
PIWIL3_chr22_24714034_24779720	24757659	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18961.hp2 NA18961.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0113 a0002c0002t0002g0113	1	386	0.0026	-10	c.355 others(25): Show c.355+239_355+248delGTGTGTGTGT	PIWIL3	ENSG00000184571.14	transcript	ENST00000616349.5	protein_coding	4/20			chr22	TogoVar
PIWIL3_chr22_24714034_24779720	24764625	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0010 a0010	a0010c0014 a0010c0014	a0010c0014t0008 a0010c0014t0008	a0010c0014t0008g0364 a0010c0014t0008g0364	1	386	0.0026	-10	c.-22 others(27): Show c.-22-2114_-22-2105delACACACACAC	PIWIL3	ENSG00000184571.14	transcript	ENST00000616349.5	protein_coding	1/20			chr22	TogoVar
PJA1_chrX_69155861_69170453	69168276	GTATATAT others(3): Show GTATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02109.hp1 HG02280.hp2 others(4): Show HG01884.hp2 HG02109.hp1 HG02280.hp2 HG02896.hp2 HG03041.hp2 HG03195.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0002g0013	7	334	0.0210	-10	c.-29 others(21): Show c.-2982_-2973delTATATATATA	PJA1	ENSG00000181191.12	transcript	ENST00000374571.5	protein_coding		2824		chrX	TogoVar
PJA2_chr5_109329722_109414974	109340621	TCCCCCTC others(3): Show TCCCCCTCCCC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG03225.hp1 HG01496.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0326 a0001c0001t0001g0195 a0001c0001t0001g0326	2	346	0.0058	-10	c.200 others(29): Show c.2002-3275_2002-3266delGGGGAGGGGG	PJA2	ENSG00000198961.10	transcript	ENST00000361189.7	protein_coding	9/9			chr5	TogoVar
PJA2_chr5_109329722_109414974	109365465	ATATATGC others(3): Show ATATATGCTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp1 HG02647.hp2 others(2): Show HG01884.hp2 HG01891.hp1 HG02647.hp2 HG02896.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0030 a0001c0001t0005g0031 a0001c0001t0005g0032 others(2): Show a0001c0001t0005g0030 a0001c0001t0005g0031 a0001c0001t0005g0032 a0001c0001t0005g0033 a0001c0001t0005g0034	5	346	0.0145	-10	c.147 others(29): Show c.1470-2453_1470-2444delAAAGCATATA	PJA2	ENSG00000198961.10	transcript	ENST00000361189.7	protein_coding	5/9			chr5	TogoVar
PJVK_chr2_178446378_178467102	178460848	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	408	0.0025	-10	c.767 others(25): Show c.767-119_767-110delAAAAAAAAAA	PJVK	ENSG00000204311.15	transcript	ENST00000644580.2	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
PKD1L1_chr7_47769614_47953466	47805086	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp1 HG00609.hp2 others(34): Show HG00408.hp2 HG00558.hp1 HG00609.hp2 HG00738.hp2 HG01109.hp2 HG01496.hp1 HG01928.hp1 HG02004.hp1 HG02015.hp2 HG02040.hp1 HG02071.hp2 HG02129.hp2 HG02165.hp2 HG02293.hp1 HG03491.hp1 HG04204.hp2 NA18747.hp1 NA18947.hp1 NA18950.hp2 NA18954.hp2 NA18962.hp1 NA18962.hp2 NA18974.hp2 NA18977.hp1 NA18981.hp2 NA18986.hp1 NA18991.hp1 NA18994.hp2 NA19060.hp2 NA19062.hp2 NA19065.hp2 NA19070.hp2 NA19077.hp2 NA19080.hp2 NA19086.hp2 NA19088.hp1 NA20805.hp1	a0001 a0004 a0005 others(11): Show a0001 a0004 a0005 a0008 a0009 a0011 a0012 a0013 a0014 a0029 a0055 a0064 a0081 a0090	a0001c0013 a0004c0012 a0004c0029 others(18): Show a0001c0013 a0004c0012 a0004c0029 a0004c0053 a0004c0056 a0004c0161 a0005c0002 a0005c0009 a0008c0010 a0008c0081 a0009c0023 a0011c0063 a0011c0133 a0012c0018 a0013c0020 a0014c0159 a0029c0035 a0055c0092 a0064c0103 a0081c0151 a0090c0058	a0001c0013t0001 a0004c0012t0001 a0004c0029t0001 others(18): Show a0001c0013t0001 a0004c0012t0001 a0004c0029t0001 a0004c0053t0001 a0004c0056t0001 a0004c0161t0001 a0005c0002t0001 a0005c0009t0001 a0008c0010t0001 a0008c0081t0001 a0009c0023t0001 a0011c0063t0001 a0011c0133t0001 a0012c0018t0001 a0013c0020t0001 a0014c0159t0001 a0029c0035t0001 a0055c0092t0001 a0064c0103t0001 a0081c0151t0001 a0090c0058t0001	a0001c0013t0001g0116 a0004c0012t0001g0247 a0004c0012t0001g0249 others(34): Show a0001c0013t0001g0116 a0004c0012t0001g0247 a0004c0012t0001g0249 a0004c0012t0001g0292 a0004c0012t0001g0293 a0004c0029t0001g0180 a0004c0053t0001g0186 a0004c0056t0001g0087 a0004c0056t0001g0090 a0004c0161t0001g0278 a0005c0002t0001g0042 a0005c0002t0001g0044 a0005c0002t0001g0113 a0005c0002t0001g0118 a0005c0002t0001g0121 a0005c0002t0001g0127 a0005c0002t0001g0135 a0005c0009t0001g0114 a0005c0009t0001g0122 a0005c0009t0001g0124 a0005c0009t0001g0126 a0005c0009t0001g0137 a0008c0010t0001g0040 a0008c0010t0001g0053 a0008c0010t0001g0132 a0008c0081t0001g0149 a0009c0023t0001g0213 a0011c0063t0001g0098 a0011c0133t0001g0184 a0012c0018t0001g0242 a0013c0020t0001g0153 a0014c0159t0001g0280 a0029c0035t0001g0085 a0055c0092t0001g0095 a0064c0103t0001g0218 a0081c0151t0001g0243 a0090c0058t0001g0059	37	306	0.1209	-10	c.782 others(29): Show c.7828-1752_7828-1743delGTGTGTGTGT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	52/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47880255	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp2 HG01943.hp2 others(11): Show HG01256.hp1 HG01258.hp2 HG01943.hp2 HG01981.hp2 HG02074.hp2 HG02683.hp2 HG02717.hp2 HG02738.hp1 HG03669.hp2 HG03710.hp2 HG03834.hp2 NA18988.hp2 NA19086.hp2 NA20905.hp2	a0013 a0014 a0018 others(5): Show a0013 a0014 a0018 a0036 a0038 a0062 a0080 a0082	a0013c0020 a0013c0039 a0014c0057 others(8): Show a0013c0020 a0013c0039 a0014c0057 a0018c0050 a0018c0155 a0036c0049 a0038c0126 a0038c0164 a0062c0062 a0080c0166 a0082c0152	a0013c0020t0001 a0013c0039t0001 a0014c0057t0001 others(8): Show a0013c0020t0001 a0013c0039t0001 a0014c0057t0001 a0018c0050t0001 a0018c0155t0001 a0036c0049t0001 a0038c0126t0001 a0038c0164t0001 a0062c0062t0001 a0080c0166t0001 a0082c0152t0001	a0013c0020t0001g0038 a0013c0020t0001g0039 a0013c0020t0001g0153 others(11): Show a0013c0020t0001g0038 a0013c0020t0001g0039 a0013c0020t0001g0153 a0013c0039t0001g0034 a0013c0039t0001g0035 a0014c0057t0001g0248 a0018c0050t0001g0190 a0018c0155t0001g0251 a0036c0049t0001g0203 a0038c0126t0001g0082 a0038c0164t0001g0256 a0062c0062t0001g0019 a0080c0166t0001g0268 a0082c0152t0001g0257	14	306	0.0458	-10	c.352 others(27): Show c.3520+463_3520+472delGTATATATAT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	21/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47902049	GAAAAGAA others(3): Show GAAAAGAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00408.hp2 others(68): Show HG00280.hp2 HG00323.hp2 HG00408.hp2 HG00597.hp2 HG00609.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01071.hp2 HG01167.hp1 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01433.hp1 HG01496.hp2 HG01884.hp1 HG01981.hp2 HG02004.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02257.hp2 HG02280.hp2 HG02300.hp1 HG02809.hp1 HG02970.hp2 HG03130.hp2 HG03195.hp2 HG03225.hp1 HG03490.hp2 HG03654.hp1 HG03831.hp1 HG04184.hp2 HG04204.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18947.hp2 NA18965.hp1 NA18967.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18974.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18988.hp2 NA18991.hp1 NA18994.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19043.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp1 NA19077.hp2 NA19080.hp1 NA19086.hp1 NA19087.hp2 NA19090.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0002 a0003 a0004 others(25): Show a0002 a0003 a0004 a0005 a0006 a0009 a0011 a0012 a0013 a0017 a0018 a0024 a0026 a0034 a0035 a0036 a0037 a0040 a0042 a0043 a0045 a0064 a0066 a0067 a0068 a0070 a0071 a0090	a0002c0003 a0002c0024 a0002c0028 others(40): Show a0002c0003 a0002c0024 a0002c0028 a0002c0048 a0002c0051 a0002c0054 a0002c0105 a0002c0111 a0002c0115 a0002c0132 a0003c0017 a0004c0053 a0005c0009 a0006c0004 a0009c0023 a0009c0102 a0011c0016 a0011c0112 a0011c0133 a0012c0148 a0013c0039 a0017c0026 a0017c0106 a0018c0050 a0018c0114 a0024c0025 a0026c0032 a0034c0047 a0035c0116 a0036c0049 a0037c0108 a0037c0109 a0040c0169 a0042c0140 a0043c0067 a0045c0071 a0064c0103 a0066c0131 a0067c0130 a0068c0113 a0070c0107 a0071c0110 a0090c0058	a0002c0003t0001 a0002c0024t0001 a0002c0028t0001 others(41): Show a0002c0003t0001 a0002c0024t0001 a0002c0028t0001 a0002c0048t0001 a0002c0051t0001 a0002c0054t0001 a0002c0105t0001 a0002c0111t0001 a0002c0115t0001 a0002c0132t0001 a0003c0017t0001 a0004c0053t0001 a0005c0009t0001 a0006c0004t0001 a0009c0023t0001 a0009c0102t0001 a0011c0016t0001 a0011c0016t0002 a0011c0112t0002 a0011c0133t0001 a0012c0148t0001 a0013c0039t0001 a0017c0026t0001 a0017c0106t0001 a0018c0050t0001 a0018c0114t0001 a0024c0025t0001 a0026c0032t0001 a0034c0047t0003 a0035c0116t0001 a0036c0049t0001 a0037c0108t0001 a0037c0109t0001 a0040c0169t0001 a0042c0140t0001 a0043c0067t0001 a0045c0071t0001 a0064c0103t0001 a0066c0131t0001 a0067c0130t0001 a0068c0113t0001 a0070c0107t0001 a0071c0110t0001 a0090c0058t0001	a0002c0003t0001g0161 a0002c0003t0001g0163 a0002c0003t0001g0173 others(68): Show a0002c0003t0001g0161 a0002c0003t0001g0163 a0002c0003t0001g0173 a0002c0003t0001g0178 a0002c0003t0001g0187 a0002c0003t0001g0191 a0002c0003t0001g0201 a0002c0003t0001g0202 a0002c0003t0001g0212 a0002c0024t0001g0167 a0002c0024t0001g0175 a0002c0028t0001g0181 a0002c0028t0001g0182 a0002c0028t0001g0204 a0002c0048t0001g0171 a0002c0048t0001g0222 a0002c0051t0001g0206 a0002c0051t0001g0207 a0002c0054t0001g0183 a0002c0054t0001g0205 a0002c0105t0001g0194 a0002c0111t0001g0220 a0002c0115t0001g0219 a0002c0132t0001g0185 a0003c0017t0001g0162 a0003c0017t0001g0195 a0003c0017t0001g0223 a0004c0053t0001g0186 a0005c0009t0001g0122 a0005c0009t0001g0124 a0006c0004t0001g0168 a0009c0023t0001g0213 a0009c0023t0001g0214 a0009c0023t0001g0217 a0009c0102t0001g0221 a0011c0016t0001g0179 a0011c0016t0002g0177 a0011c0016t0002g0198 a0011c0112t0002g0196 a0011c0133t0001g0184 a0012c0148t0001g0088 a0013c0039t0001g0034 a0013c0039t0001g0035 a0017c0026t0001g0197 a0017c0026t0001g0199 a0017c0106t0001g0166 a0018c0050t0001g0190 a0018c0050t0001g0209 a0018c0114t0001g0192 a0024c0025t0001g0063 a0024c0025t0001g0193 a0024c0025t0001g0208 a0026c0032t0001g0145 a0034c0047t0003g0061 a0034c0047t0003g0062 a0035c0116t0001g0189 a0036c0049t0001g0200 a0036c0049t0001g0203 a0037c0108t0001g0159 a0037c0109t0001g0176 a0040c0169t0001g0303 a0042c0140t0001g0172 a0043c0067t0001g0112 a0045c0071t0001g0123 a0064c0103t0001g0218 a0066c0131t0001g0060 a0067c0130t0001g0160 a0068c0113t0001g0211 a0070c0107t0001g0169 a0071c0110t0001g0210 a0090c0058t0001g0059	71	306	0.2320	-10	c.206 others(27): Show c.2064+320_2064+329delTTTTTCTTTT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	13/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47943157	AAAAAAAA others(3): Show AAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0027 a0027	a0027c0064 a0027c0064	a0027c0064t0001 a0027c0064t0001	a0027c0064t0001g0027 a0027c0064t0001g0027	1	306	0.0033	-10	c.160 others(25): Show c.160+229_160+238delATATTTTTTT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	2/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47943159	AAAAAATA others(3): Show AAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18951.hp2 NA19009.hp2 NA18612.hp2 NA18951.hp2 NA19009.hp2	a0001 a0044 a0001 a0044	a0001c0007 a0001c0036 a0044c0072 a0001c0007 a0001c0036 a0044c0072	a0001c0007t0001 a0001c0036t0001 a0044c0072t0001 a0001c0007t0001 a0001c0036t0001 a0044c0072t0001	a0001c0007t0001g0033 a0001c0036t0001g0096 a0044c0072t0001g0097 a0001c0007t0001g0033 a0001c0036t0001g0096 a0044c0072t0001g0097	3	306	0.0098	-10	c.160 others(25): Show c.160+227_160+236delATATATTTTT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	2/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47943161	AAAATATA others(3): Show AAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(4): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG01243.hp1 HG01255.hp2 HG02155.hp2 HG02976.hp1	a0001 a0013 a0025 others(3): Show a0001 a0013 a0025 a0029 a0049 a0059	a0001c0006 a0001c0036 a0013c0076 others(4): Show a0001c0006 a0001c0036 a0013c0076 a0025c0030 a0029c0035 a0049c0069 a0059c0080	a0001c0006t0001 a0001c0036t0001 a0013c0076t0001 others(4): Show a0001c0006t0001 a0001c0036t0001 a0013c0076t0001 a0025c0030t0002 a0029c0035t0002 a0049c0069t0001 a0059c0080t0002	a0001c0006t0001g0109 a0001c0036t0001g0111 a0013c0076t0001g0110 others(4): Show a0001c0006t0001g0109 a0001c0036t0001g0111 a0013c0076t0001g0110 a0025c0030t0002g0301 a0029c0035t0002g0106 a0049c0069t0001g0107 a0059c0080t0002g0108	7	306	0.0229	-10	c.160 others(25): Show c.160+225_160+234delATATATATTT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	2/56			chr7	TogoVar
PKD1L1_chr7_47769614_47953466	47943163	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03041.hp2 HG02630.hp1 HG03041.hp2	a0001 a0016 a0001 a0016	a0001c0139 a0016c0022 a0001c0139 a0016c0022	a0001c0139t0001 a0016c0022t0001 a0001c0139t0001 a0016c0022t0001	a0001c0139t0001g0300 a0016c0022t0001g0230 a0001c0139t0001g0300 a0016c0022t0001g0230	2	306	0.0065	-10	c.160 others(25): Show c.160+223_160+232delATATATATAT	PKD1L1	ENSG00000158683.10	transcript	ENST00000289672.7	protein_coding	2/56			chr7	TogoVar

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