view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCML1_chrX_17732493_17759985 | 17737422 | GCCCCCCC others(5): Show |
G | upstream_gene_variant | MODIFIER | NA20129.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 281 | 0.0036 | -12 | c.-37 others(21): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 70 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18251309 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01099.hp1 HG01928.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 others(3): Show |
6 | 247 | 0.0243 | -12 | c.145 others(31): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 11/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18257958 | AAAGGGAA others(5): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00544.hp1 HG00597.hp1 others(82): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0001g0138 a0001c0001t0001g0164 a0001c0001t0001g0206 others(82): Show |
85 | 247 | 0.3441 | -12 | c.127 others(27): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 10/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18262540 | CATGTTGG others(5): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02109.hp1 HG02451.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 others(11): Show |
14 | 247 | 0.0567 | -12 | c.949 others(29): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 8/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18264431 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG00323.hp2 HG00544.hp1 HG00597.hp1 others(68): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0007 | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(1): Show | a0001c0001t0001g0164 a0001c0001t0001g0206 a0001c0001t0001g0223 others(68): Show |
71 | 247 | 0.2875 | -12 | c.948 others(29): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 8/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18347723 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG02132.hp1 HG02717.hp1 NA18945.hp1 others(2): Show |
a0001a0005 | a0001c0001a0005c0003 | a0001c0001t0001a0005c0003t0001 | a0001c0001t0001g0104 a0001c0001t0001g0148 a0001c0001t0001g0208 others(2): Show |
5 | 247 | 0.0202 | -12 | c.-25 others(29): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 1/14 | chrX | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107751572 | ATCTTTCT others(5): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG01884.hp2 HG02056.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0023others(5): Show | a0001c0001t0002g0168 a0001c0001t0002g0177 a0001c0001t0002g0206 others(10): Show |
13 | 250 | 0.0520 | -12 | c.157 others(29): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 2/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107784889 | GAGCAGAC others(5): Show |
G | intron_variant | MODIFIER | HG02055.hp1 HG02630.hp2 HG02922.hp1 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0013others(6): Show | a0001c0001t0001g0076 a0001c0001t0006g0077 a0001c0001t0013g0011 others(8): Show |
11 | 250 | 0.0440 | -12 | c.-59 others(31): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107802576 | GAGGGAGG others(5): Show |
G | intron_variant | MODIFIER | HG02717.hp2 HG02818.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0109 a0001c0001t0006g0116 |
2 | 250 | 0.0080 | -12 | c.-60 others(31): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107802666 | TCTCCCTC others(5): Show |
T | intron_variant | MODIFIER | HG01099.hp1 HG01167.hp2 HG01257.hp2 others(23): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0004others(5): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(12): Show | a0001c0001t0003g0014 a0001c0001t0003g0021 a0001c0001t0003g0026 others(23): Show |
26 | 250 | 0.1040 | -12 | c.-60 others(31): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107813413 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG02886.hp2 HG03041.hp2 NA18949.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0011 | a0001c0001t0004a0001c0001t0013a0001c0002t0005others(1): Show | a0001c0001t0004g0208 a0001c0001t0013g0068 a0001c0002t0005g0209 others(2): Show |
5 | 250 | 0.0200 | -12 | c.-60 others(31): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107824462 | CTGTGTGT others(5): Show |
C | upstream_gene_variant | MODIFIER | HG00609.hp2 HG00735.hp2 HG01099.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0013others(13): Show | a0001c0001t0001g0109 a0001c0001t0006g0022 a0001c0001t0013g0118 others(20): Show |
23 | 250 | 0.0920 | -12 | c.-40 others(21): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 150 | chr6 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38719367 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00544.hp2 others(49): Show |
a0002a0006a0007others(4): Show | a0002c0001a0002c0015a0002c0023others(9): Show | a0002c0001t0001a0002c0001t0002a0002c0015t0001others(10): Show | a0002c0001t0001g0050 a0002c0001t0001g0063 a0002c0001t0001g0064 others(49): Show |
52 | 372 | 0.1398 | -12 | c.350 others(29): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 20/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38736361 | CTGTGTGT others(5): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG01169.hp1 HG02257.hp1 others(4): Show |
a0005 | a0005c0009a0005c0011 | a0005c0009t0002a0005c0009t0003a0005c0011t0001 | a0005c0009t0002g0104 a0005c0009t0002g0149 a0005c0009t0002g0150 others(4): Show |
7 | 372 | 0.0188 | -12 | c.228 others(31): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38746063 | GTATATAT others(5): Show |
G | intron_variant | MODIFIER | HG02896.hp1 HG02897.hp2 HG03453.hp1 |
a0002 | a0002c0014 | a0002c0014t0001 | a0002c0014t0001g0085 a0002c0014t0001g0106 a0002c0014t0001g0108 |
3 | 372 | 0.0081 | -12 | c.186 others(31): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 13/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38761854 | GAGAGAGA others(5): Show |
G | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0130 | 1 | 372 | 0.0027 | -12 | c.692 others(27): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 6/27 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38907310 | ATGTGTGT others(5): Show |
A | intron_variant | MODIFIER | HG00140.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0157 | 1 | 314 | 0.0032 | -12 | c.147 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 14/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38907332 | GTGTGTGT others(5): Show |
G | intron_variant | MODIFIER | HG00733.hp1 HG02109.hp1 HG02630.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0001a0001c0002t0004 | a0001c0001t0002g0147 a0001c0002t0001g0152 a0001c0002t0001g0153 others(2): Show |
5 | 314 | 0.0159 | -12 | c.147 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 14/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38907334 | GTGTGTGT others(5): Show |
G | intron_variant | MODIFIER | HG03139.hp2 | a0005 | a0005c0017 | a0005c0017t0015 | a0005c0017t0015g0208 | 1 | 314 | 0.0032 | -12 | c.147 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 14/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938509 | CATATATA others(5): Show |
C | intron_variant | MODIFIER | NA20805.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0160 | 1 | 314 | 0.0032 | -12 | c.488 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938542 | ATATATAT others(5): Show |
A | intron_variant | MODIFIER | HG00558.hp2 HG03453.hp2 |
a0001 | a0001c0002a0001c0006 | a0001c0002t0001a0001c0006t0003 | a0001c0002t0001g0176 a0001c0006t0003g0308 |
2 | 314 | 0.0064 | -12 | c.488 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938548 | ATATTTTT others(5): Show |
A | intron_variant | MODIFIER | HG02647.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0207 | 1 | 314 | 0.0032 | -12 | c.488 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38963352 | GATATATA others(5): Show |
G | intron_variant | MODIFIER | HG03453.hp2 | a0001 | a0001c0006 | a0001c0006t0003 | a0001c0006t0003g0308 | 1 | 314 | 0.0032 | -12 | c.-27 others(31): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38987299 | TCTCTCAC others(5): Show |
T | intron_variant | MODIFIER | HG01175.hp2 HG01257.hp2 NA20805.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 others(1): Show |
4 | 314 | 0.0127 | -12 | c.-27 others(33): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38988030 | GGCGCCCG others(5): Show |
G | intron_variant | MODIFIER | HG01934.hp2 HG02258.hp1 HG02280.hp2 others(11): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0009others(5): Show | a0001c0001t0001a0001c0002t0004a0001c0002t0014others(6): Show | a0001c0001t0001g0207 a0001c0002t0004g0262 a0001c0002t0014g0199 others(11): Show |
14 | 314 | 0.0446 | -12 | c.-27 others(33): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38995807 | ATCTATCT others(5): Show |
A | intron_variant | MODIFIER | HG03098.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0285 | 1 | 314 | 0.0032 | -12 | c.-27 others(33): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39012416 | CTCTTTCT others(5): Show |
C | intron_variant | MODIFIER | HG02723.hp2 HG02809.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0238 a0001c0002t0001g0239 |
2 | 314 | 0.0064 | -12 | c.-28 others(33): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 165989028 | CTGTGTGT others(5): Show |
C | 3_prime_UTR_variant | MODIFIER | HG02109.hp2 HG02647.hp1 |
a0001 | a0001c0006 | a0001c0006t0041 | a0001c0006t0041g0095 a0001c0006t0041g0248 |
2 | 356 | 0.0056 | -12 | c.*22 others(23): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 29/29 | 2205 | chr2 | TogoVar | ||||||
SCN1A_chr2_165980813_166133020 | 165989063 | TGTGTGCG others(5): Show |
T | 3_prime_UTR_variant | MODIFIER | HG01358.hp1 HG02040.hp2 HG02735.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0022a0001c0001t0058 | a0001c0001t0022g0209 a0001c0001t0022g0216 a0001c0001t0022g0244 others(1): Show |
4 | 356 | 0.0112 | -12 | c.*21 others(23): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 29/29 | 2170 | chr2 | TogoVar | ||||||
SCN1A_chr2_165980813_166133020 | 166103449 | TTAAATAA others(5): Show |
T | intron_variant | MODIFIER | HG00423.hp2 HG00642.hp1 HG01069.hp2 others(28): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0025 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(11): Show | a0001c0001t0002g0260 a0001c0001t0002g0262 a0001c0001t0002g0268 others(28): Show |
31 | 356 | 0.0871 | -12 | c.-14 others(33): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35028744 | ATTTTTTT others(5): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00438.hp1 others(72): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0010 others(16): Show |
75 | 404 | 0.1856 | -12 | c.-20 others(23): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 1725 | chr19 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35029542 | CAAAAAAA others(5): Show |
C | upstream_gene_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 | 1 | 404 | 0.0025 | -12 | c.-12 others(23): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 927 | chr19 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35030437 | GGCCGCCG others(5): Show |
G | upstream_gene_variant | MODIFIER | HG01168.hp2 HG03710.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0091 |
3 | 404 | 0.0074 | -12 | c.-38 others(21): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 32 | chr19 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35036732 | CTATTATT others(5): Show |
C | intron_variant | MODIFIER | HG02074.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0088 | 1 | 404 | 0.0025 | -12 | c.449 others(29): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165265468 | GATCTATA others(5): Show |
G | intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0103 | 1 | 358 | 0.0028 | -12 | c.-52 others(31): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165265471 | CTATATAT others(5): Show |
C | intron_variant | MODIFIER | HG03209.hp2 NA18943.hp2 NA18946.hp2 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0023 a0001c0002t0001g0084 a0001c0002t0001g0227 others(2): Show |
5 | 358 | 0.0140 | -12 | c.-52 others(31): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165272764 | TCACACAC others(5): Show |
T | intron_variant | MODIFIER | HG00673.hp1 HG00741.hp1 HG02132.hp2 others(25): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0036 a0001c0001t0002g0199 a0001c0001t0002g0301 others(24): Show |
28 | 358 | 0.0782 | -12 | c.-51 others(31): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291345 | GTCGTTCG others(5): Show |
G | intron_variant | MODIFIER | HG02723.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0187 | 1 | 358 | 0.0028 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291348 | GTTCGTTC others(5): Show |
G | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp2 others(22): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0166 a0001c0001t0001g0202 a0001c0001t0001g0206 others(22): Show |
25 | 358 | 0.0698 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291352 | GTTCCTTC others(5): Show |
G | intron_variant | MODIFIER | HG00673.hp1 HG01192.hp1 HG01243.hp1 others(19): Show |
a0001 | a0001c0002a0001c0009a0001c0010 | a0001c0002t0001a0001c0009t0001a0001c0010t0001 | a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0005 others(18): Show |
22 | 358 | 0.0615 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291482 | CTTTCTTT others(5): Show |
C | intron_variant | MODIFIER | NA18940.hp2 NA18952.hp1 NA18998.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0004 a0001c0002t0001g0006 a0001c0002t0001g0007 others(3): Show |
6 | 358 | 0.0168 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165291483 | TTTCTTTC others(5): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG01346.hp2 HG01496.hp1 others(6): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0042 a0001c0001t0001g0285 a0001c0001t0001g0288 others(6): Show |
9 | 358 | 0.0251 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291525 | TTTCCTTC others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp1 HG00735.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0002a0001c0002t0001a0001c0006t0002 | a0001c0001t0002g0050 a0001c0001t0002g0057 a0001c0001t0002g0082 others(7): Show |
10 | 358 | 0.0279 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291567 | TCCTTCCT others(5): Show |
T | intron_variant | MODIFIER | HG00408.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0146 | 1 | 358 | 0.0028 | -12 | c.-51 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165306504 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG01261.hp2 HG02109.hp1 HG02451.hp2 others(4): Show |
a0001 | a0001c0001a0001c0006a0001c0015 | a0001c0001t0002a0001c0001t0007a0001c0001t0013others(2): Show | a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0007g0187 others(4): Show |
7 | 358 | 0.0196 | -12 | c.387 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165380119 | TATTTATA others(5): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02895.hp1 HG02897.hp1 others(2): Show |
a0001 | a0001c0004 | a0001c0004t0004 | a0001c0004t0004g0158 a0001c0004t0004g0185 a0001c0004t0004g0226 others(2): Show |
5 | 358 | 0.0140 | -12 | c.430 others(29): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 23/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2B_chr11_118157806_118181639 | 118162074 | GAGACAGA others(5): Show |
G | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00408.hp1 others(195): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0009others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(94): Show |
198 | 450 | 0.4400 | -12 | c.*48 others(23): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 731 | chr11 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118172509 | GGCAGGCC others(5): Show |
G | intron_variant | MODIFIER | HG00408.hp2 NA18747.hp2 NA18952.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0029 a0001c0001t0001g0194 |
4 | 450 | 0.0089 | -12 | c.71- others(27): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 1/3 | chr11 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118178896 | ATTATTTT others(5): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 450 | 0.0022 | -12 | c.-24 others(23): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 2258 | chr11 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118179405 | ATTCTTTT others(5): Show |
A | upstream_gene_variant | MODIFIER | HG04204.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0230 | 1 | 450 | 0.0022 | -12 | c.-29 others(23): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 2767 | chr11 | TogoVar |