view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSG101_chr11_18475311_18531942 | 18529117 | AAT | A | upstream_gene_variant | MODIFIER | HG02965.hp1 HG03098.hp1 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0388 a0001c0001t0001g0389 a0001c0001t0001g0390 |
3 | 406 | 0.0074 | -2 | c.-23 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 2176 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18530573 | CAG | C | upstream_gene_variant | MODIFIER | HG02630.hp2 HG02976.hp2 HG03130.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 |
3 | 406 | 0.0074 | -2 | c.-37 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 3632 | chr11 | TogoVar | |||||||
TSGA10IP_chr11_65940480_65964966 | 65948959 | AGT | A | intron_variant | MODIFIER | HG01109.hp2 HG02559.hp2 HG02965.hp1 others(5): Show |
a0009a0010a0012 | a0009c0011a0010c0012a0012c0014 | a0009c0011t0001a0010c0012t0001a0012c0014t0001 | a0009c0011t0001g0033 a0009c0011t0001g0079 a0010c0012t0001g0034 others(3): Show |
8 | 392 | 0.0204 | -2 | c.115 others(19): Show |
TSGA10IP | ENSG00000175513.10 | transcript | ENST00000532620.6 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
TSGA10IP_chr11_65940480_65964966 | 65950560 | ATT | A | intron_variant | MODIFIER | HG00673.hp1 HG01891.hp2 HG02074.hp2 others(22): Show |
a0002a0003 | a0002c0010a0002c0019a0003c0003 | a0002c0010t0001a0002c0019t0001a0003c0003t0001 | a0002c0010t0001g0037 a0002c0010t0001g0100 a0002c0019t0001g0198 others(10): Show |
25 | 392 | 0.0638 | -2 | c.115 others(21): Show |
TSGA10IP | ENSG00000175513.10 | transcript | ENST00000532620.6 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
TSGA10_chr2_98992261_99159942 | 98992956 | CAT | C | downstream_gene_variant | MODIFIER | HG01243.hp2 HG02809.hp2 HG02818.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(6): Show |
9 | 324 | 0.0278 | -2 | c.*52 others(13): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 4304 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 98993312 | CTT | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00544.hp2 others(116): Show |
a0001a0003a0007 | a0001c0001a0003c0005a0007c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(116): Show |
119 | 324 | 0.3673 | -2 | c.*48 others(13): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 3948 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99022324 | CAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00544.hp2 others(84): Show |
a0001a0003a0007 | a0001c0001a0003c0005a0007c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0002g0214 others(84): Show |
87 | 324 | 0.2685 | -2 | c.161 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 17/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99031286 | CAA | C | intron_variant | MODIFIER | HG00423.hp2 HG01070.hp1 HG01070.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007 | a0001c0001t0001g0054 a0001c0001t0001g0086 a0001c0001t0001g0088 others(9): Show |
12 | 324 | 0.0370 | -2 | c.161 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 17/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99055860 | CAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(171): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0001c0007others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0217 others(171): Show |
174 | 324 | 0.5370 | -2 | c.140 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99059049 | AAT | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(134): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0001c0007others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 others(134): Show |
137 | 324 | 0.4228 | -2 | c.140 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99059076 | ATT | A | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01496.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007 | a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 others(6): Show |
9 | 324 | 0.0278 | -2 | c.140 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99059080 | TTA | T | intron_variant | MODIFIER | HG01123.hp1 HG01361.hp2 HG01891.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006 | a0001c0001t0002g0228 a0001c0001t0002g0235 a0001c0001t0002g0237 others(11): Show |
14 | 324 | 0.0432 | -2 | c.140 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 16/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99072019 | CAA | C | intron_variant | MODIFIER | HG00609.hp1 HG00621.hp1 NA18747.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0266 a0001c0001t0002g0299 a0001c0001t0002g0301 others(12): Show |
15 | 324 | 0.0463 | -2 | c.939 others(17): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 13/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99076387 | ATT | A | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01496.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0114 a0001c0001t0007g0115 a0001c0001t0007g0116 others(1): Show |
4 | 324 | 0.0124 | -2 | c.882 others(19): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 12/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99077127 | CTT | C | intron_variant | MODIFIER | HG01099.hp2 HG01168.hp2 HG02056.hp2 others(28): Show |
a0001a0007 | a0001c0001a0001c0004a0007c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0012 a0001c0001t0001g0028 a0001c0001t0001g0030 others(28): Show |
31 | 324 | 0.0957 | -2 | c.882 others(19): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 12/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99093546 | GAA | G | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00544.hp1 others(139): Show |
a0001a0004a0005others(1): Show | a0001c0001a0001c0007a0004c0006others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(8): Show | a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 others(139): Show |
142 | 324 | 0.4383 | -2 | c.611 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 10/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99118947 | CTG | C | intron_variant | MODIFIER | HG00733.hp1 HG00738.hp2 HG01106.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 others(13): Show |
16 | 324 | 0.0494 | -2 | c.-49 others(19): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 2/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99130996 | ATC | A | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01496.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0114 a0001c0001t0007g0115 a0001c0001t0007g0116 others(1): Show |
4 | 324 | 0.0124 | -2 | c.-62 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 1/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99138420 | GTC | G | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01496.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0114 a0001c0001t0007g0115 a0001c0001t0007g0116 others(1): Show |
4 | 324 | 0.0124 | -2 | c.-62 others(23): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 1/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99143133 | CTT | C | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00609.hp2 others(53): Show |
a0001a0002a0005 | a0001c0001a0001c0007a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0013others(3): Show | a0001c0001t0001g0022 a0001c0001t0001g0029 a0001c0001t0001g0037 others(53): Show |
56 | 324 | 0.1728 | -2 | c.-62 others(23): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 1/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99151463 | CAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00408.hp2 others(187): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0007a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(11): Show | a0001c0001t0001g0012 a0001c0001t0001g0017 a0001c0001t0001g0018 others(187): Show |
190 | 324 | 0.5864 | -2 | c.-62 others(21): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 1/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99155987 | ATG | A | upstream_gene_variant | MODIFIER | HG00741.hp2 HG01109.hp1 HG01243.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 a0001c0001t0001g0092 a0001c0001t0001g0093 |
3 | 324 | 0.0093 | -2 | c.-19 others(13): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 1046 | chr2 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130663730 | CTT | C | downstream_gene_variant | MODIFIER | HG01069.hp1 HG01099.hp1 HG01167.hp2 others(52): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0025 others(31): Show |
55 | 386 | 0.1425 | -2 | c.*52 others(13): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 4912 | chr7 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130668376 | AAG | A | downstream_gene_variant | MODIFIER | HG02572.hp1 HG02922.hp2 HG03041.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0019 a0001c0001t0005g0056 |
4 | 386 | 0.0104 | -2 | c.*63 others(11): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 266 | chr7 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130675072 | GAA | G | intron_variant | MODIFIER | HG00735.hp2 HG01168.hp2 HG01169.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | 6 | 386 | 0.0155 | -2 | c.388 others(19): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 5/7 | chr7 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130686693 | TAC | T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG01070.hp2 others(33): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0106 others(21): Show |
36 | 386 | 0.0933 | -2 | c.-58 others(11): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 149 | chr7 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130686739 | CAT | C | upstream_gene_variant | MODIFIER | HG01496.hp2 HG01891.hp1 HG01978.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0010 a0001c0001t0002g0023 a0001c0001t0002g0032 others(3): Show |
12 | 386 | 0.0311 | -2 | c.-63 others(11): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 195 | chr7 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 80950906 | GAA | G | upstream_gene_variant | MODIFIER | HG02886.hp2 HG03130.hp1 HG03453.hp2 others(3): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0003a0001c0002t0001a0001c0002t0012others(2): Show | a0001c0001t0003g0088 a0001c0001t0003g0100 a0001c0002t0001g0014 others(3): Show |
6 | 270 | 0.0222 | -2 | c.-47 others(13): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 4714 | chr14 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 80967186 | GTA | G | intron_variant | MODIFIER | HG00733.hp1 HG00741.hp1 HG01071.hp1 others(55): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(11): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0015 others(55): Show |
58 | 270 | 0.2148 | -2 | c.170 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 80978094 | AAC | A | intron_variant | MODIFIER | HG01081.hp2 HG01192.hp1 HG02055.hp1 others(38): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0008others(5): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(15): Show | a0001c0001t0002g0063 a0001c0001t0003g0084 a0001c0001t0003g0087 others(38): Show |
41 | 270 | 0.1519 | -2 | c.170 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81001520 | CAT | C | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00438.hp2 others(58): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0110 a0001c0001t0001g0118 a0001c0001t0001g0133 others(58): Show |
61 | 270 | 0.2259 | -2 | c.170 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | chr14 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 81002781 | CTT | C | intron_variant | MODIFIER | HG01081.hp2 HG01243.hp1 HG01891.hp2 others(18): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0076 a0001c0001t0002g0063 a0001c0001t0003g0084 others(18): Show |
21 | 270 | 0.0778 | -2 | c.170 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81005257 | ATC | A | intron_variant | MODIFIER | HG01106.hp2 HG01109.hp2 HG01243.hp2 others(42): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0001g0016 a0001c0001t0001g0101 a0001c0001t0001g0104 others(41): Show |
45 | 270 | 0.1667 | -2 | c.170 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81067483 | TTA | T | intron_variant | MODIFIER | HG02145.hp2 HG02895.hp1 HG02897.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0001t0009a0001c0002t0005 | a0001c0001t0005g0001 a0001c0001t0009g0244 a0001c0002t0005g0079 |
4 | 270 | 0.0148 | -2 | c.243 others(17): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81067927 | CTA | C | intron_variant | MODIFIER | HG00558.hp1 HG03239.hp2 NA18522.hp1 others(5): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0050 a0001c0001t0001g0133 a0001c0001t0001g0168 others(5): Show |
8 | 270 | 0.0296 | -2 | c.243 others(17): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81073010 | AAT | A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00323.hp2 others(61): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0032 others(61): Show |
64 | 270 | 0.2370 | -2 | c.317 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81073021 | AAT | A | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00408.hp2 others(43): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0005a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 others(43): Show |
46 | 270 | 0.1704 | -2 | c.317 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81074038 | CAA | C | intron_variant | MODIFIER | HG02280.hp1 HG03195.hp2 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005 | a0001c0001t0003g0074 a0001c0001t0003g0216 a0001c0001t0005g0075 |
3 | 270 | 0.0111 | -2 | c.317 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81083029 | GAA | G | intron_variant | MODIFIER | HG00639.hp1 HG01074.hp2 HG01109.hp2 others(66): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0006others(4): Show | a0001c0001t0003a0001c0001t0005a0001c0002t0001others(15): Show | a0001c0001t0003g0074 a0001c0001t0003g0216 a0001c0001t0005g0075 others(66): Show |
69 | 270 | 0.2556 | -2 | c.318 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81083468 | TAA | T | intron_variant | MODIFIER | HG00639.hp1 HG01074.hp2 HG01109.hp2 others(50): Show |
a0001a0002a0004 | a0001c0002a0001c0006a0002c0003others(1): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(10): Show | a0001c0002t0001g0002 a0001c0002t0001g0038 a0001c0002t0001g0060 others(50): Show |
53 | 270 | 0.1963 | -2 | c.318 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81088986 | CTT | C | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp1 HG02257.hp1 others(25): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(11): Show | a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0236 others(25): Show |
28 | 270 | 0.1037 | -2 | c.392 others(17): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81096059 | AAT | A | intron_variant | MODIFIER | HG00323.hp1 HG00438.hp1 HG00639.hp1 others(65): Show |
a0001a0002a0003others(2): Show | a0001c0002a0001c0006a0002c0003others(3): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(12): Show | a0001c0002t0001g0002 a0001c0002t0001g0014 a0001c0002t0001g0038 others(65): Show |
68 | 270 | 0.2519 | -2 | c.546 others(17): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 6/9 | chr14 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 81106938 | CAA | C | intron_variant | MODIFIER | HG02027.hp2 HG02040.hp2 HG02129.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0021 | a0001c0001t0001g0113 a0001c0001t0004g0184 a0001c0001t0004g0190 others(5): Show |
8 | 270 | 0.0296 | -2 | c.615 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81113703 | CAA | C | intron_variant | MODIFIER | HG01346.hp1 HG02040.hp1 HG02055.hp2 others(40): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0005others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(10): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0015 others(39): Show |
43 | 270 | 0.1593 | -2 | c.692 others(19): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 8/9 | chr14 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 81121933 | ACT | A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00438.hp2 others(69): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0008others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0104 a0001c0001t0002g0047 a0001c0001t0002g0114 others(69): Show |
72 | 270 | 0.2667 | -2 | c.692 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81122020 | CTT | C | intron_variant | MODIFIER | HG00639.hp1 HG00733.hp1 HG00741.hp1 others(39): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0129 a0001c0001t0002g0018 a0001c0001t0002g0021 others(39): Show |
42 | 270 | 0.1556 | -2 | c.692 others(21): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHZ1_chr18_75205797_75294944 | 75210894 | TGA | T | 5_prime_UTR_variant | MODIFIER | HG00741.hp1 HG00741.hp2 HG01081.hp1 others(15): Show |
a0001a0002a0007others(1): Show | a0001c0001a0001c0005a0001c0009others(4): Show | a0001c0001t0008a0001c0001t0056a0001c0001t0058others(7): Show | a0001c0001t0008g0232 a0001c0001t0008g0233 a0001c0001t0008g0293 others(15): Show |
18 | 326 | 0.0552 | -2 | c.-98 others(11): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/2 | 980 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
TSHZ1_chr18_75205797_75294944 | 75216785 | CAG | C | intron_variant | MODIFIER | HG00544.hp1 HG01891.hp2 HG02148.hp1 others(27): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0001c0025others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0148 others(26): Show |
30 | 326 | 0.0920 | -2 | c.40+ others(17): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
TSHZ1_chr18_75205797_75294944 | 75224061 | TAA | T | intron_variant | MODIFIER | HG01257.hp1 HG01884.hp2 HG01981.hp1 others(15): Show |
a0001a0002a0008 | a0001c0001a0001c0004a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(13): Show | a0001c0001t0001g0296 a0001c0001t0004g0117 a0001c0001t0007g0140 others(15): Show |
18 | 326 | 0.0552 | -2 | c.40+ others(19): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
TSHZ1_chr18_75205797_75294944 | 75246403 | GGT | G | intron_variant | MODIFIER | HG00735.hp2 HG01070.hp1 HG01071.hp1 others(16): Show |
a0001a0002 | a0001c0001a0001c0012a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0175 a0001c0001t0002g0216 a0001c0001t0003g0005 others(15): Show |
19 | 326 | 0.0583 | -2 | c.40+ others(19): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr18 | TogoVar |