view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSPEAR_chr21_44492893_44716572 | 44555507 | TAC | T | intron_variant | MODIFIER | HG01891.hp1 HG02922.hp2 HG03098.hp1 others(1): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0003g0091 a0001c0001t0004g0031 a0001c0001t0005g0028 others(1): Show |
4 | 294 | 0.0136 | -2 | c.303 others(21): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 2/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44572834 | GAC | G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00642.hp2 others(29): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0016 a0001c0001t0001g0024 a0001c0001t0001g0029 others(29): Show |
32 | 294 | 0.1088 | -2 | c.83- others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44588728 | GTA | G | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00423.hp2 others(143): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0015others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0021 others(143): Show |
146 | 294 | 0.4966 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44597173 | AAC | A | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp1 HG02896.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0203 a0001c0001t0003g0003 a0001c0001t0003g0218 others(3): Show |
6 | 294 | 0.0204 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44599134 | TTC | T | intron_variant | MODIFIER | HG01167.hp2 HG01884.hp2 HG02055.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002a0001c0015 | a0001c0001t0001a0001c0001t0003a0001c0002t0008others(1): Show | a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0238 others(12): Show |
15 | 294 | 0.0510 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44603065 | CAG | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(213): Show |
a0000a0001a0002others(5): Show | a0000c0011a0001c0001a0001c0002others(10): Show | a0000c0011t0025a0001c0001t0001a0001c0001t0002others(26): Show | a0000c0011t0025g0111 a0001c0001t0001g0001 a0001c0001t0001g0002 others(213): Show |
216 | 294 | 0.7347 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44606163 | CAA | C | intron_variant | MODIFIER | HG02280.hp1 HG02280.hp2 HG02559.hp1 others(7): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0029 a0001c0001t0001g0096 a0001c0001t0001g0202 others(7): Show |
10 | 294 | 0.0340 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44608047 | CAG | C | intron_variant | MODIFIER | HG02451.hp2 HG02723.hp2 HG02818.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0014 a0001c0001t0001g0026 a0001c0001t0003g0004 others(1): Show |
4 | 294 | 0.0136 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44635345 | CAA | C | intron_variant | MODIFIER | HG01123.hp1 HG01167.hp1 HG02109.hp2 others(3): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0012 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0199 a0001c0001t0001g0279 a0001c0001t0003g0224 others(3): Show |
6 | 294 | 0.0204 | -2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44646124 | CAA | C | intron_variant | MODIFIER | HG01243.hp1 HG01257.hp1 HG02257.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0115 others(12): Show |
15 | 294 | 0.0510 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44651975 | CTT | C | intron_variant | MODIFIER | HG01891.hp2 HG02486.hp1 HG03471.hp2 others(2): Show |
a0001 | a0001c0001a0001c0017 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0001g0015 a0001c0001t0001g0101 a0001c0001t0003g0091 others(2): Show |
5 | 294 | 0.0170 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44651979 | CTT | C | intron_variant | MODIFIER | HG00280.hp2 HG01070.hp2 HG01081.hp1 others(45): Show |
a0001a0003a0007others(1): Show | a0001c0001a0001c0007a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(45): Show |
48 | 294 | 0.1633 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44654847 | CCG | C | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp2 HG01070.hp2 others(31): Show |
a0001a0003a0007 | a0001c0001a0003c0005a0007c0014 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0048 a0001c0001t0001g0049 others(31): Show |
34 | 294 | 0.1157 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44654848 | CGT | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00438.hp2 others(127): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0004others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(127): Show |
130 | 294 | 0.4422 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44661281 | CAA | C | intron_variant | MODIFIER | HG01168.hp1 HG01257.hp1 HG01258.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0140 a0001c0001t0001g0202 a0001c0001t0001g0245 others(4): Show |
7 | 294 | 0.0238 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44673932 | CAT | C | intron_variant | MODIFIER | HG00099.hp2 HG01074.hp1 HG02257.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0222 others(3): Show |
6 | 294 | 0.0204 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44674731 | AGT | A | intron_variant | MODIFIER | HG00438.hp1 HG01070.hp1 HG01071.hp2 others(28): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0003a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0040 others(28): Show |
31 | 294 | 0.1054 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44677033 | TAA | T | intron_variant | MODIFIER | HG00099.hp2 HG01074.hp1 HG02257.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0222 others(3): Show |
6 | 294 | 0.0204 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44693647 | ATT | A | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(201): Show |
a0000a0001a0002others(3): Show | a0000c0011a0001c0001a0001c0002others(10): Show | a0000c0011t0025a0001c0001t0001a0001c0001t0002others(25): Show | a0000c0011t0025g0111 a0001c0001t0001g0001 a0001c0001t0001g0002 others(201): Show |
204 | 294 | 0.6939 | -2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44708007 | GCA | G | intron_variant | MODIFIER | HG00597.hp1 HG01123.hp1 HG01192.hp2 others(9): Show |
a0000a0001 | a0000c0011a0001c0001a0001c0004 | a0000c0011t0025a0001c0001t0001a0001c0001t0002others(1): Show | a0000c0011t0025g0111 a0001c0001t0001g0020 a0001c0001t0001g0054 others(9): Show |
12 | 294 | 0.0408 | -2 | c.82+ others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44708737 | CCT | C | intron_variant | MODIFIER | HG02109.hp1 HG02451.hp2 HG02723.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0014 a0001c0001t0001g0157 a0001c0001t0001g0221 others(4): Show |
7 | 294 | 0.0238 | -2 | c.82+ others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58297028 | CAG | C | downstream_gene_variant | MODIFIER | HG01884.hp2 HG02486.hp2 HG02630.hp2 others(2): Show |
a0008a0040 | a0008c0014a0040c0062 | a0008c0014t0001a0040c0062t0001 | a0008c0014t0001g0009 a0040c0062t0001g0101 |
5 | 342 | 0.0146 | -2 | c.*54 others(13): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 4202 | chr17 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58304050 | CAT | C | intron_variant | MODIFIER | HG01891.hp2 HG02895.hp1 HG02897.hp1 others(8): Show |
a0007a0019a0021others(3): Show | a0007c0010a0019c0057a0021c0029others(3): Show | a0007c0010t0001a0019c0057t0008a0021c0029t0001others(3): Show | a0007c0010t0001g0022 a0007c0010t0001g0176 a0007c0010t0001g0181 others(5): Show |
11 | 342 | 0.0322 | -2 | c.*32 others(17): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 31/31 | chr17 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58313607 | CAA | C | intron_variant | MODIFIER | HG00438.hp1 HG00558.hp1 HG00673.hp2 others(39): Show |
a0001a0004a0007others(14): Show | a0001c0001a0004c0005a0004c0008others(17): Show | a0001c0001t0001a0004c0005t0001a0004c0008t0001others(18): Show | a0001c0001t0001g0126 a0004c0005t0001g0052 a0004c0005t0001g0053 others(26): Show |
42 | 342 | 0.1228 | -2 | c.209 others(19): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 16/31 | chr17 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58321300 | CTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00597.hp2 others(40): Show |
a0001a0002a0013others(3): Show | a0001c0001a0001c0004a0002c0002others(4): Show | a0001c0001t0001a0001c0004t0001a0001c0004t0016others(5): Show | a0001c0001t0001g0026 a0001c0001t0001g0068 a0001c0001t0001g0085 others(22): Show |
43 | 342 | 0.1257 | -2 | c.142 others(19): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 10/31 | chr17 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43147225 | CAA | C | upstream_gene_variant | MODIFIER | HG01243.hp1 HG02055.hp1 HG02615.hp2 others(6): Show |
a0001a0002a0005 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0004t0001others(2): Show | a0001c0001t0001g0015 a0001c0001t0003g0017 a0001c0001t0003g0124 others(3): Show |
9 | 400 | 0.0225 | -2 | c.-44 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 4333 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43147617 | CAA | C | upstream_gene_variant | MODIFIER | HG00642.hp1 HG02717.hp1 HG02896.hp1 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0002a0003c0003t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0031 others(4): Show |
7 | 400 | 0.0175 | -2 | c.-40 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 3941 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43150176 | GAA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(320): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(95): Show |
323 | 400 | 0.8075 | -2 | c.-14 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1382 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43153336 | CTT | C | intron_variant | MODIFIER | HG02451.hp1 HG02896.hp2 HG02897.hp1 others(5): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0003a0003c0003t0001 | a0001c0001t0001g0018 a0001c0001t0001g0054 a0001c0001t0003g0043 others(1): Show |
8 | 400 | 0.0200 | -2 | c.-30 others(19): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
TSPO_chr22_43146559_43168242 | 43162693 | TGA | T | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00558.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0031 others(5): Show |
21 | 400 | 0.0525 | -2 | c.322 others(17): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
TSPO_chr22_43146559_43168242 | 43164303 | AAC | A | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00558.hp2 others(22): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0003c0003t0001 | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0013 others(9): Show |
25 | 400 | 0.0625 | -2 | c.*13 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1062 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43165136 | TTA | T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(229): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0004t0001others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 others(66): Show |
232 | 400 | 0.5800 | -2 | c.*21 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1895 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43167466 | CCT | C | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00558.hp2 HG01109.hp2 others(17): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0006 a0001c0001t0001g0016 a0001c0001t0001g0035 others(5): Show |
20 | 400 | 0.0500 | -2 | c.*44 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 4225 | chr22 | TogoVar | |||||||
TSPY10_chrY_9522880_9535676 | 9533848 | CAT | C | downstream_gene_variant | MODIFIER | NA19089.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 1 | 1.0000 | -2 | c.*33 others(13): Show |
TSPY10 | ENSG00000236424.7 | transcript | ENST00000428845.6 | protein_coding | 3173 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9462352 | ACC | A | upstream_gene_variant | MODIFIER | HG02965.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0005 | 1 | 23 | 0.0435 | -2 | c.-46 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 4602 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9465688 | CTG | C | upstream_gene_variant | MODIFIER | HG02738.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 23 | 0.0435 | -2 | c.-13 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 1266 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9469765 | CTG | C | downstream_gene_variant | MODIFIER | HG01358.hp2 HG01515.hp1 HG02602.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0002a0001c0004t0003a0002c0002t0002 | a0001c0001t0002g0001 a0001c0004t0003g0008 a0002c0002t0002g0002 |
6 | 23 | 0.2609 | -2 | c.*20 others(11): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 17 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9469789 | TTG | T | downstream_gene_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0004 | a0001c0004t0003 | a0001c0004t0003g0008 | 1 | 23 | 0.0435 | -2 | c.*22 others(11): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 41 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9472964 | TAC | T | downstream_gene_variant | MODIFIER | HG01069.hp2 NA18960.hp2 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0001 a0003c0003t0001g0003 |
2 | 23 | 0.0870 | -2 | c.*34 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 3216 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9473895 | TGA | T | downstream_gene_variant | MODIFIER | NA18982.hp1 | a0007 | a0007c0006 | a0007c0006t0005 | a0007c0006t0005g0010 | 1 | 23 | 0.0435 | -2 | c.*43 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 4147 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9474072 | CTT | C | downstream_gene_variant | MODIFIER | NA19007.hp2 | a0003 | a0003c0011 | a0003c0011t0002 | a0003c0011t0002g0007 | 1 | 23 | 0.0435 | -2 | c.*45 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 4324 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6241587 | AAC | A | upstream_gene_variant | MODIFIER | NA18989.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0003 | 1 | 108 | 0.0093 | -2 | c.-46 others(13): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 4635 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6249055 | TTG | T | downstream_gene_variant | MODIFIER | HG01515.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 108 | 0.0093 | -2 | c.*23 others(11): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 38 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6249079 | GTA | G | downstream_gene_variant | MODIFIER | HG00140.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 108 | 0.0093 | -2 | c.*25 others(11): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 62 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6252193 | CAT | C | downstream_gene_variant | MODIFIER | HG03225.hp1 NA19072.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0001 a0002c0002t0001g0001 |
2 | 108 | 0.0185 | -2 | c.*33 others(13): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 3176 | chrY | TogoVar | |||||||
TSPYL1_chr6_116269858_116284930 | 116270631 | GAC | G | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02622.hp1 HG02622.hp2 others(15): Show |
a0003 | a0003c0003 | a0003c0003t0013a0003c0003t0018a0003c0003t0020others(4): Show | a0003c0003t0013g0000 a0003c0003t0018g0000 a0003c0003t0020g0000 others(4): Show |
18 | 416 | 0.0433 | -2 | c.*78 others(13): Show |
TSPYL1 | ENSG00000189241.8 | transcript | ENST00000368608.4 | protein_coding | 4226 | chr6 | TogoVar | |||||||
TSPYL1_chr6_116269858_116284930 | 116277908 | CAA | C | 3_prime_UTR_variant | MODIFIER | HG01243.hp1 HG02486.hp1 HG02559.hp2 others(14): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0011a0002c0002t0015a0003c0003t0025others(3): Show | a0002c0002t0011g0000 a0002c0002t0015g0000 a0003c0003t0025g0000 others(3): Show |
17 | 416 | 0.0409 | -2 | c.*60 others(11): Show |
TSPYL1 | ENSG00000189241.8 | transcript | ENST00000368608.4 | protein_coding | 1/1 | 607 | chr6 | TogoVar | ||||||
TSPYL2_chrX_53077367_53093540 | 53077998 | TTC | T | upstream_gene_variant | MODIFIER | HG01978.hp1 NA18967.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0003 a0001c0001t0002g0002 |
2 | 258 | 0.0078 | -2 | c.-45 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4368 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53078016 | CTG | C | upstream_gene_variant | MODIFIER | HG02257.hp1 HG02630.hp1 HG02976.hp2 others(5): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0001c0001t0005a0006c0006t0004 | a0001c0001t0001g0002 a0001c0001t0001g0022 a0001c0001t0001g0042 others(3): Show |
8 | 258 | 0.0310 | -2 | c.-44 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4350 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53078018 | GTC | G | upstream_gene_variant | MODIFIER | NA19087.hp2 | a0009 | a0009c0009 | a0009c0009t0009 | a0009c0009t0009g0053 | 1 | 258 | 0.0039 | -2 | c.-44 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4348 | chrX | TogoVar |