view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNTN1_chr12_40687439_41077415 | 40773636 | TATATATA others(53): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(124): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0038 a0001c0001t0001g0049 a0001c0001t0001g0101 others(124): Show |
127 | 230 | 0.5522 | -60 | c.-77 others(79): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CNTN6_chr3_1088024_1409217 | 1245218 | ATATATAT others(53): Show |
A | intron_variant | MODIFIER | HG01261.hp1 HG02132.hp1 NA18950.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0001g0149 a0001c0002t0001g0045 a0001c0003t0001g0165 others(1): Show |
4 | 232 | 0.0172 | -60 | c.358 others(79): Show |
CNTN6 | ENSG00000134115.13 | transcript | ENST00000446702.7 | protein_coding | 4/22 | chr3 | TogoVar | |||||||
CNTNAP5_chr2_124020287_124926219 | 124670582 | TCTTGTTG others(53): Show |
T | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG01069.hp1 others(57): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 others(57): Show |
60 | 64 | 0.9375 | -60 | c.207 others(81): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124860444 | CTTCCTTC others(53): Show |
C | intron_variant | MODIFIER | NA18906.hp1 NA19043.hp1 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0011 | a0001c0002t0001g0062 a0001c0002t0011g0029 |
2 | 64 | 0.0313 | -60 | c.321 others(79): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45497394 | GGTGTGGC others(53): Show |
G | intron_variant | MODIFIER | HG03579.hp1 | a0008 | a0008c0018 | a0008c0018t0005 | a0008c0018t0005g0132 | 1 | 292 | 0.0034 | -60 | c.262 others(77): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 31/41 | chr21 | TogoVar | |||||||
COL18A1_chr21_45400165_45518720 | 45510951 | AACACCCC others(53): Show |
A | intron_variant | MODIFIER | HG02280.hp1 | a0019 | a0019c0096 | a0019c0096t0015 | a0019c0096t0015g0045 | 1 | 292 | 0.0034 | -60 | c.369 others(77): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 40/41 | chr21 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178448110 | ACAGTCCG others(53): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG01167.hp1 HG01884.hp1 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0003others(4): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0003g0159 a0001c0001t0003g0166 a0001c0001t0003g0212 others(18): Show |
21 | 236 | 0.0890 | -60 | c.361 others(81): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178525190 | GGGACCCG others(53): Show |
G | intron_variant | MODIFIER | HG03239.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0036 | 1 | 236 | 0.0042 | -60 | c.361 others(79): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178525430 | AGGACCCG others(53): Show |
A | intron_variant | MODIFIER | HG01243.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0073 | 1 | 236 | 0.0042 | -60 | c.361 others(79): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178525610 | GGGACCCG others(53): Show |
G | intron_variant | MODIFIER | HG02630.hp1 HG03017.hp2 HG03239.hp2 others(3): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0003a0001c0001t0004a0001c0004t0001others(3): Show | a0001c0001t0003g0027 a0001c0001t0004g0174 a0001c0004t0001g0070 others(3): Show |
6 | 236 | 0.0254 | -60 | c.361 others(79): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL2A1_chr12_47967967_48009476 | 47971778 | TATATGTA others(53): Show |
T | downstream_gene_variant | MODIFIER | HG02895.hp2 | a0011 | a0011c0045 | a0011c0045t0001 | a0011c0045t0001g0268 | 1 | 414 | 0.0024 | -60 | c.*15 others(71): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1188 | chr12 | TogoVar | |||||||
COL3A1_chr2_188969373_189017746 | 188997014 | TATATATA others(53): Show |
T | intron_variant | MODIFIER | HG02145.hp2 HG03516.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0010 | a0001c0001t0001g0112 a0001c0001t0010g0111 |
2 | 376 | 0.0053 | -60 | c.176 others(76): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 24/50 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110219854 | ATGTATAT others(53): Show |
A | intron_variant | MODIFIER | HG02965.hp2 HG02976.hp2 |
a0003 | a0003c0012 | a0003c0012t0001 | a0003c0012t0001g0179 a0003c0012t0001g0180 |
2 | 344 | 0.0058 | -60 | c.145 others(77): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 2/51 | chr13 | TogoVar | |||||||
COL4A2_chr13_110302284_110518209 | 110481158 | TGTTCTGT others(53): Show |
T | intron_variant | MODIFIER | HG03486.hp1 | a0002 | a0002c0111 | a0002c0111t0015 | a0002c0111t0015g0368 | 1 | 372 | 0.0027 | -60 | c.275 others(77): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 31/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110481442 | GTTGCTGG others(53): Show |
G | intron_variant | MODIFIER | NA20300.hp2 | a0003 | a0003c0093 | a0003c0093t0010 | a0003c0093t0010g0148 | 1 | 372 | 0.0027 | -60 | c.275 others(78): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 31/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110481490 | TTCTGTCC others(53): Show |
T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02809.hp1 others(1): Show |
a0003a0020 | a0003c0039a0003c0040a0003c0118others(1): Show | a0003c0039t0008a0003c0040t0001a0003c0118t0036others(1): Show | a0003c0039t0008g0027 a0003c0040t0001g0203 a0003c0118t0036g0139 others(1): Show |
4 | 372 | 0.0108 | -60 | c.275 others(77): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 31/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A2_chr13_110302284_110518209 | 110481772 | ATTGCTGG others(53): Show |
A | intron_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0074 | a0001c0074t0014 | a0001c0074t0014g0043 | 1 | 372 | 0.0027 | -60 | c.275 others(77): Show |
COL4A2 | ENSG00000134871.19 | transcript | ENST00000360467.7 | protein_coding | 31/47 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL4A3_chr2_227159624_227319792 | 227203489 | GTATATGT others(53): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG01070.hp2 others(9): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0007a0003c0002others(6): Show | a0001c0001t0001a0002c0007t0001a0003c0002t0003others(6): Show | a0001c0001t0001g0257 a0001c0001t0001g0292 a0002c0007t0001g0310 others(9): Show |
12 | 344 | 0.0349 | -60 | c.88- others(77): Show |
COL4A3 | ENSG00000169031.21 | transcript | ENST00000396578.8 | protein_coding | 1/51 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227041782 | GGAAGGGA others(53): Show |
G | intron_variant | MODIFIER | HG02145.hp2 | a0013 | a0013c0013 | a0013c0013t0006 | a0013c0013t0006g0155 | 1 | 284 | 0.0035 | -60 | c.350 others(77): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | |||||||
COL5A1_chr9_134636803_134849843 | 134734218 | CACAGGAA others(53): Show |
C | intron_variant | MODIFIER | HG00558.hp2 HG01099.hp1 HG01106.hp1 others(2): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0049others(2): Show | a0001c0001t0001g0125 a0001c0001t0002g0243 a0001c0003t0049g0158 others(2): Show |
5 | 272 | 0.0184 | -60 | c.138 others(79): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 9/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46134617 | TAGGGTCA others(53): Show |
T | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00597.hp1 NA18941.hp2 others(3): Show |
a0003 | a0003c0007 | a0003c0007t0007 | a0003c0007t0007g0042 a0003c0007t0007g0048 a0003c0007t0007g0195 others(3): Show |
6 | 372 | 0.0161 | -60 | c.*51 others(71): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 4817 | chr21 | TogoVar | |||||||
COL6A2_chr21_46093112_46137848 | 46134617 | TAGGGTCA others(53): Show |
T | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00597.hp1 NA18941.hp2 others(3): Show |
a0003 | a0003c0008 | a0003c0008t0003 | a0003c0008t0003g0044 a0003c0008t0003g0050 a0003c0008t0003g0191 others(3): Show |
6 | 364 | 0.0165 | -60 | c.*20 others(71): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 1770 | chr21 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813162 | GGAGCCCA others(53): Show |
G | upstream_gene_variant | MODIFIER | HG04199.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0216 | 1 | 412 | 0.0024 | -60 | c.-39 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3887 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813253 | AGCAGGAC others(53): Show |
A | upstream_gene_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG00741.hp2 others(11): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0010others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(2): Show | a0001c0001t0001g0029 a0001c0001t0001g0255 a0001c0001t0006g0259 others(10): Show |
14 | 412 | 0.0340 | -60 | c.-38 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3796 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813308 | CGCCCGGC others(53): Show |
C | upstream_gene_variant | MODIFIER | NA19088.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0127 | 1 | 412 | 0.0024 | -60 | c.-37 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3741 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813331 | CGAGCCAG others(53): Show |
C | upstream_gene_variant | MODIFIER | HG02683.hp1 NA18985.hp1 NA19004.hp2 others(1): Show |
a0002a0008 | a0002c0020a0008c0019a0008c0044 | a0002c0020t0001a0008c0019t0001a0008c0044t0002 | a0002c0020t0001g0099 a0008c0019t0001g0353 a0008c0019t0001g0354 others(1): Show |
4 | 412 | 0.0097 | -60 | c.-37 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3718 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813391 | TGAGCCAG others(53): Show |
T | upstream_gene_variant | MODIFIER | HG01515.hp2 HG03225.hp2 NA18986.hp1 |
a0001a0007 | a0001c0001a0001c0003a0007c0018 | a0001c0001t0001a0001c0003t0001a0007c0018t0001 | a0001c0001t0001g0231 a0001c0003t0001g0284 a0007c0018t0001g0100 |
3 | 412 | 0.0073 | -60 | c.-36 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3658 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813488 | CGCCCGGC others(53): Show |
C | upstream_gene_variant | MODIFIER | HG02622.hp1 HG02970.hp2 HG03209.hp2 others(2): Show |
a0001a0002a0003 | a0001c0001a0002c0008a0003c0009others(1): Show | a0001c0001t0001a0002c0008t0001a0003c0009t0001others(1): Show | a0001c0001t0001g0020 a0002c0008t0001g0105 a0003c0009t0001g0013 others(2): Show |
5 | 412 | 0.0121 | -60 | c.-35 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3561 | chr20 | TogoVar | |||||||
COL9A3_chr20_62812050_62846159 | 62813511 | CGAGCCAG others(53): Show |
C | upstream_gene_variant | MODIFIER | NA21309.hp1 | a0001 | a0001c0010 | a0001c0010t0002 | a0001c0010t0002g0134 | 1 | 412 | 0.0024 | -60 | c.-35 others(71): Show |
COL9A3 | ENSG00000092758.18 | transcript | ENST00000649368.1 | protein_coding | 3538 | chr20 | TogoVar | |||||||
COLEC11_chr2_3590112_3649644 | 3605366 | GGGGGCGG others(53): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG03486.hp2 HG06807.hp1 |
a0002a0005 | a0002c0002a0005c0011 | a0002c0002t0001a0005c0011t0001 | a0002c0002t0001g0189 a0002c0002t0001g0190 a0005c0011t0001g0032 |
3 | 378 | 0.0079 | -60 | c.130 others(75): Show |
COLEC11 | ENSG00000118004.18 | transcript | ENST00000349077.9 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COLEC11_chr2_3590112_3649644 | 3640746 | TGGACACC others(53): Show |
T | intron_variant | MODIFIER | HG04199.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0171 | 1 | 378 | 0.0027 | -60 | c.328 others(75): Show |
COLEC11 | ENSG00000118004.18 | transcript | ENST00000349077.9 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COP1_chr1_175939831_176212286 | 175998024 | GCACAATG others(53): Show |
G | intron_variant | MODIFIER | HG02970.hp2 | a0001 | a0001c0006 | a0001c0006t0012 | a0001c0006t0012g0268 | 1 | 300 | 0.0033 | -60 | c.173 others(79): Show |
COP1 | ENSG00000143207.21 | transcript | ENST00000367669.8 | protein_coding | 15/19 | chr1 | TogoVar | |||||||
CPLX1_chr4_779957_831129 | 826406 | GGGGCGGG others(53): Show |
G | upstream_gene_variant | MODIFIER | NA18967.hp2 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0100 | 1 | 416 | 0.0024 | -60 | c.-50 others(69): Show |
CPLX1 | ENSG00000168993.15 | transcript | ENST00000304062.11 | protein_coding | 278 | chr4 | TogoVar | |||||||
CPSF6_chr12_69234569_69279358 | 69236234 | ATAGCATA others(53): Show |
A | upstream_gene_variant | MODIFIER | HG00423.hp1 HG01361.hp2 HG01884.hp1 others(17): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0008a0001c0001t0030others(4): Show | a0001c0001t0003g0001 a0001c0001t0003g0081 a0001c0001t0003g0169 others(9): Show |
20 | 392 | 0.0510 | -60 | c.-34 others(71): Show |
CPSF6 | ENSG00000111605.18 | transcript | ENST00000435070.7 | protein_coding | 3334 | chr12 | TogoVar | |||||||
CRLF2_chrX_1185490_1217649 | 1198126 | GGGAAGGC others(53): Show |
G | intron_variant | MODIFIER | NA18999.hp1 NA19011.hp2 NA19065.hp2 others(1): Show |
a0001a0009 | a0001c0008a0001c0044a0009c0037 | a0001c0008t0001a0001c0044t0001a0009c0037t0001 | a0001c0008t0001g0141 a0001c0008t0001g0154 a0001c0044t0001g0153 others(1): Show |
4 | 167 | 0.0240 | -60 | c.646 others(75): Show |
CRLF2 | ENSG00000205755.13 | transcript | ENST00000400841.8 | protein_coding | 5/7 | chrX | TogoVar | |||||||
CRLF2_chrX_1185490_1217649 | 1211493 | ATAAGTGG others(53): Show |
A | intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0095 | 1 | 167 | 0.0060 | -60 | c.79+ others(75): Show |
CRLF2 | ENSG00000205755.13 | transcript | ENST00000400841.8 | protein_coding | 1/7 | chrX | TogoVar | |||||||
CRLF2_chrX_1185490_1217649 | 1211639 | GGATGGAT others(53): Show |
G | intron_variant | MODIFIER | HG03041.hp2 | a0005 | a0005c0026 | a0005c0026t0002 | a0005c0026t0002g0102 | 1 | 167 | 0.0060 | -60 | c.79+ others(73): Show |
CRLF2 | ENSG00000205755.13 | transcript | ENST00000400841.8 | protein_coding | 1/7 | chrX | TogoVar | |||||||
CROCC2_chr2_240901336_240998311 | 240985223 | GGCACTCA others(53): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(92): Show |
a0002a0003a0006others(19): Show | a0002c0002a0002c0011a0002c0012others(25): Show | a0002c0002t0001a0002c0002t0002a0002c0011t0002others(30): Show | a0002c0002t0001g0060 a0002c0002t0001g0131 a0002c0002t0001g0132 others(91): Show |
95 | 350 | 0.2714 | -60 | c.455 others(79): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 28/31 | chr2 | TogoVar | |||||||
CROCC2_chr2_240901336_240998311 | 240985351 | GGCACTCA others(53): Show |
G | intron_variant | MODIFIER | NA18984.hp1 NA19056.hp1 |
a0007 | a0007c0006 | a0007c0006t0001 | a0007c0006t0001g0013 a0007c0006t0001g0088 |
2 | 350 | 0.0057 | -60 | c.455 others(79): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 28/31 | chr2 | TogoVar | |||||||
CSAD_chr12_53152663_53185925 | 53184116 | TGTGTGTG others(53): Show |
T | upstream_gene_variant | MODIFIER | HG02965.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0054 | 1 | 334 | 0.0030 | -60 | c.-35 others(71): Show |
CSAD | ENSG00000139631.20 | transcript | ENST00000444623.6 | protein_coding | 3192 | chr12 | TogoVar | |||||||
CSMD1_chr8_2930361_4999914 | 3338145 | TGCTAAAA others(53): Show |
T | intron_variant | MODIFIER | HG02074.hp2 | a0002 | a0002c0091 | a0002c0091t0002 | a0002c0091t0002g0114 | 1 | 126 | 0.0079 | -60 | c.363 others(79): Show |
CSMD1 | ENSG00000183117.20 | transcript | ENST00000635120.2 | protein_coding | 23/69 | chr8 | TogoVar | |||||||
CSMD1_chr8_2930361_4999914 | 3772524 | CACATATA others(53): Show |
C | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG02056.hp1 others(5): Show |
a0001a0023a0025 | a0001c0002a0001c0003a0001c0005others(5): Show | a0001c0002t0002a0001c0003t0013a0001c0005t0002others(5): Show | a0001c0002t0002g0083 a0001c0003t0013g0026 a0001c0005t0002g0111 others(5): Show |
8 | 126 | 0.0635 | -60 | c.819 others(79): Show |
CSMD1 | ENSG00000183117.20 | transcript | ENST00000635120.2 | protein_coding | 5/69 | chr8 | TogoVar | |||||||
CSMD1_chr8_2930361_4999914 | 4295094 | ACACATAT others(53): Show |
A | intron_variant | MODIFIER | HG02615.hp1 NA18522.hp2 NA18995.hp2 others(2): Show |
a0001a0002a0026others(1): Show | a0001c0085a0001c0102a0002c0072others(2): Show | a0001c0085t0020a0001c0102t0005a0002c0072t0003others(2): Show | a0001c0085t0020g0060 a0001c0102t0005g0034 a0002c0072t0003g0066 others(2): Show |
5 | 126 | 0.0397 | -60 | c.415 others(81): Show |
CSMD1 | ENSG00000183117.20 | transcript | ENST00000635120.2 | protein_coding | 3/69 | chr8 | TogoVar | |||||||
CSMD1_chr8_2930361_4999914 | 4761852 | TATCTATC others(53): Show |
T | intron_variant | MODIFIER | NA18995.hp1 | a0001 | a0001c0109 | a0001c0109t0038 | a0001c0109t0038g0013 | 1 | 126 | 0.0079 | -60 | c.86- others(79): Show |
CSMD1 | ENSG00000183117.20 | transcript | ENST00000635120.2 | protein_coding | 1/69 | chr8 | TogoVar | |||||||
CSMD1_chr8_2930361_4999914 | 4920882 | AAAAGAAA others(53): Show |
A | intron_variant | MODIFIER | HG02257.hp2 HG02647.hp1 HG02922.hp1 others(2): Show |
a0001a0002a0003others(1): Show | a0001c0002a0002c0015a0002c0075others(2): Show | a0001c0002t0028a0002c0015t0021a0002c0075t0026others(2): Show | a0001c0002t0028g0005 a0002c0015t0021g0008 a0002c0075t0026g0051 others(2): Show |
5 | 126 | 0.0397 | -60 | c.85+ others(77): Show |
CSMD1 | ENSG00000183117.20 | transcript | ENST00000635120.2 | protein_coding | 1/69 | chr8 | TogoVar | |||||||
CSMD3_chr8_112217928_113441939 | 113272459 | AGGGGTTT others(53): Show |
A | intron_variant | MODIFIER | HG01081.hp2 HG03139.hp1 |
a0001 | a0001c0001a0001c0024 | a0001c0001t0004a0001c0024t0002 | a0001c0001t0004g0042 a0001c0024t0002g0024 |
2 | 80 | 0.0250 | -60 | c.514 others(77): Show |
CSMD3 | ENSG00000164796.18 | transcript | ENST00000297405.10 | protein_coding | 3/70 | chr8 | TogoVar | |||||||
CSNK1A1_chr5_149487982_149556439 | 149542612 | ATATATAT others(53): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0038a0001c0001t0040 | a0001c0001t0038g0028 a0001c0001t0040g0029 |
2 | 390 | 0.0051 | -60 | c.230 others(77): Show |
CSNK1A1 | ENSG00000113712.19 | transcript | ENST00000377843.8 | protein_coding | 2/9 | chr5 | TogoVar | |||||||
CSNK1G2_chr19_1936172_1986338 | 1967673 | CTCCTCCC others(53): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG01256.hp2 HG01981.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0185 others(10): Show |
14 | 382 | 0.0367 | -60 | c.-26 others(79): Show |
CSNK1G2 | ENSG00000133275.16 | transcript | ENST00000255641.13 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
CSNK1G2_chr19_1936172_1986338 | 1968182 | GGGGCTCC others(53): Show |
G | intron_variant | MODIFIER | HG02486.hp2 HG02886.hp2 HG02895.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0241 others(5): Show |
8 | 382 | 0.0209 | -60 | c.-26 others(79): Show |
CSNK1G2 | ENSG00000133275.16 | transcript | ENST00000255641.13 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
CST7_chr20_24944269_24964928 | 24961582 | GGGAATTA others(53): Show |
G | downstream_gene_variant | MODIFIER | HG02572.hp1 HG02965.hp2 HG03098.hp2 |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0012 | a0001c0001t0010g0102 a0001c0001t0010g0104 a0001c0001t0012g0103 |
3 | 350 | 0.0086 | -60 | c.*18 others(71): Show |
CST7 | ENSG00000077984.6 | transcript | ENST00000480798.2 | protein_coding | 1655 | chr20 | TogoVar |