view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCAPER_chr15_76342904_76910340 | 76406615 | TACACAC | T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00323.hp2 others(120): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0005a0001c0007others(8): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0008others(13): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(120): Show |
123 | 312 | 0.3942 | -6 | c.331 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 26/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76488714 | CTTTTTT | C | intron_variant | MODIFIER | HG01167.hp2 HG02135.hp1 HG02896.hp1 others(3): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0166 a0001c0001t0003g0118 a0001c0001t0004g0111 others(3): Show |
6 | 312 | 0.0192 | -6 | c.295 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 24/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76495989 | GAGAGAC | G | intron_variant | MODIFIER | HG02258.hp2 HG02280.hp2 HG02647.hp1 others(2): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0002 | a0001c0001t0001g0004 a0001c0001t0001g0166 a0003c0003t0002g0198 others(2): Show |
5 | 312 | 0.0160 | -6 | c.295 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 24/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76495991 | GAGACAC | G | intron_variant | MODIFIER | HG00280.hp2 HG00621.hp1 HG00621.hp2 others(27): Show |
a0001a0009a0014others(1): Show | a0001c0001a0001c0005a0001c0010others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0005t0001others(4): Show | a0001c0001t0001g0022 a0001c0001t0001g0043 a0001c0001t0001g0044 others(27): Show |
30 | 312 | 0.0962 | -6 | c.295 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 24/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76568190 | CATATAT | C | intron_variant | MODIFIER | HG01496.hp1 HG03540.hp2 NA18522.hp2 others(3): Show |
a0001a0003a0009 | a0001c0001a0003c0003a0009c0013 | a0001c0001t0003a0003c0003t0002a0003c0003t0006others(1): Show | a0001c0001t0003g0114 a0001c0001t0003g0117 a0001c0001t0003g0146 others(3): Show |
6 | 312 | 0.0192 | -6 | c.283 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 23/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76570546 | TAAGTCC | T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(127): Show |
a0001a0003a0006others(2): Show | a0001c0001a0001c0005a0001c0007others(8): Show | a0001c0001t0001a0001c0001t0008a0001c0005t0001others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(127): Show |
130 | 312 | 0.4167 | -6 | c.283 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 23/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76600387 | ATGTGTG | A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00621.hp1 others(60): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(60): Show |
63 | 312 | 0.2019 | -6 | c.271 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 22/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76615486 | CACACAG | C | intron_variant | MODIFIER | HG00621.hp1 NA18946.hp1 NA18948.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0141 a0001c0001t0003g0156 a0001c0001t0003g0164 |
3 | 312 | 0.0096 | -6 | c.271 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 22/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76615492 | GACACAC | G | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp2 HG00621.hp2 others(80): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0007others(5): Show | a0001c0001t0001a0001c0005t0001a0001c0007t0001others(7): Show | a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 others(80): Show |
83 | 312 | 0.2660 | -6 | c.271 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 22/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76637740 | ATATGTG | A | intron_variant | MODIFIER | HG02258.hp1 HG02818.hp2 HG03130.hp2 others(1): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0004a0002c0002t0002a0003c0003t0002 | a0001c0001t0004g0152 a0002c0002t0002g0261 a0003c0003t0002g0192 others(1): Show |
4 | 312 | 0.0128 | -6 | c.264 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 21/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76637742 | ATGTGTG | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00544.hp2 others(45): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0001g0096 a0001c0001t0001g0138 a0001c0001t0001g0166 others(45): Show |
48 | 312 | 0.1539 | -6 | c.264 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 21/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76652273 | AATATAT | A | intron_variant | MODIFIER | HG00544.hp2 HG00597.hp1 HG00639.hp1 others(41): Show |
a0001a0002a0008others(3): Show | a0001c0004a0002c0002a0008c0015others(3): Show | a0001c0004t0001a0001c0004t0009a0002c0002t0002others(4): Show | a0001c0004t0001g0128 a0001c0004t0001g0129 a0001c0004t0001g0130 others(41): Show |
44 | 312 | 0.1410 | -6 | c.264 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 21/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76652518 | TACACAC | T | intron_variant | MODIFIER | HG02080.hp1 HG02280.hp2 HG02300.hp1 others(2): Show |
a0001a0002a0007 | a0001c0001a0001c0018a0002c0002others(1): Show | a0001c0001t0001a0001c0018t0001a0002c0002t0002others(1): Show | a0001c0001t0001g0004 a0001c0018t0001g0173 a0002c0002t0002g0262 others(2): Show |
5 | 312 | 0.0160 | -6 | c.264 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 21/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76667625 | CAAAAAA | C | intron_variant | MODIFIER | HG01255.hp2 HG02109.hp1 HG02809.hp1 others(3): Show |
a0001a0003 | a0001c0010a0003c0003 | a0001c0010t0001a0003c0003t0002a0003c0003t0011 | a0001c0010t0001g0167 a0001c0010t0001g0168 a0003c0003t0002g0205 others(3): Show |
6 | 312 | 0.0192 | -6 | c.250 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 20/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76673950 | TATACAC | T | intron_variant | MODIFIER | NA18967.hp1 NA18973.hp1 NA19005.hp2 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0224 a0002c0002t0002g0235 a0002c0002t0002g0236 others(2): Show |
5 | 312 | 0.0160 | -6 | c.250 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 20/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76673952 | TACACAC | T | intron_variant | MODIFIER | HG00323.hp2 HG00544.hp1 HG00621.hp2 others(70): Show |
a0001a0015 | a0001c0001a0001c0005a0001c0007others(3): Show | a0001c0001t0001a0001c0005t0001a0001c0007t0001others(4): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 others(70): Show |
73 | 312 | 0.2340 | -6 | c.250 others(25): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 20/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76680411 | GATAATA | G | intron_variant | MODIFIER | HG00280.hp2 HG00544.hp1 HG00621.hp2 others(91): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0004a0001c0005others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(14): Show | a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 others(91): Show |
94 | 312 | 0.3013 | -6 | c.250 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 20/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76684989 | CTATAGT | C | intron_variant | MODIFIER | HG00280.hp2 HG00621.hp1 HG00733.hp2 others(42): Show |
a0001a0004a0009others(1): Show | a0001c0001a0004c0006a0009c0013others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0138 a0001c0001t0001g0160 a0001c0001t0003g0114 others(42): Show |
45 | 312 | 0.1442 | -6 | c.250 others(27): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 20/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76855457 | CAAAAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00323.hp2 others(87): Show |
a0001a0015 | a0001c0001a0001c0005a0001c0010others(3): Show | a0001c0001t0001a0001c0001t0008a0001c0005t0001others(4): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(87): Show |
90 | 312 | 0.2885 | -6 | c.195 others(23): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 4/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76899167 | GCTCTCC | G | intron_variant | MODIFIER | HG02055.hp2 HG02559.hp2 HG02970.hp2 |
a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0174 a0006c0008t0001g0175 a0006c0008t0001g0176 |
3 | 312 | 0.0096 | -6 | c.-60 others(23): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 1/31 | chr15 | TogoVar | |||||||
SCAPER_chr15_76342904_76910340 | 76910275 | TACACAC | T | upstream_gene_variant | MODIFIER | HG02809.hp1 HG02886.hp2 HG02965.hp1 others(5): Show |
a0003 | a0003c0003 | a0003c0003t0002a0003c0003t0011 | a0003c0003t0002g0205 a0003c0003t0002g0206 a0003c0003t0002g0207 others(5): Show |
8 | 312 | 0.0256 | -6 | c.-50 others(17): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 4936 | chr15 | TogoVar | |||||||
SCAP_chr3_47408681_47480941 | 47435465 | AACATAC | A | intron_variant | MODIFIER | HG00408.hp1 HG01106.hp1 HG01175.hp1 others(18): Show |
a0002a0003a0010 | a0002c0002a0002c0011a0003c0004others(1): Show | a0002c0002t0001a0002c0011t0001a0003c0004t0001others(1): Show | a0002c0002t0001g0050 a0002c0002t0001g0059 a0002c0002t0001g0060 others(18): Show |
21 | 304 | 0.0691 | -6 | c.123 others(21): Show |
SCAP | ENSG00000114650.21 | transcript | ENST00000265565.10 | protein_coding | 2/22 | chr3 | TogoVar | |||||||
SCAP_chr3_47408681_47480941 | 47435469 | TACACAC | T | intron_variant | MODIFIER | HG00558.hp2 HG00609.hp2 HG00621.hp2 others(28): Show |
a0001a0002a0012others(1): Show | a0001c0001a0001c0022a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0020 a0001c0001t0001g0136 a0001c0001t0001g0175 others(28): Show |
31 | 304 | 0.1020 | -6 | c.123 others(21): Show |
SCAP | ENSG00000114650.21 | transcript | ENST00000265565.10 | protein_coding | 2/22 | chr3 | TogoVar | |||||||
SCAP_chr3_47408681_47480941 | 47443233 | TACACAC | T | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp2 HG00597.hp2 others(108): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0001c0005others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(13): Show | a0001c0001t0001g0067 a0001c0001t0001g0136 a0001c0001t0001g0173 others(108): Show |
111 | 304 | 0.3651 | -6 | c.-98 others(21): Show |
SCAP | ENSG00000114650.21 | transcript | ENST00000265565.10 | protein_coding | 1/22 | chr3 | TogoVar | |||||||
SCAP_chr3_47408681_47480941 | 47443272 | ACACACT | A | intron_variant | MODIFIER | HG00735.hp1 HG01192.hp1 HG01928.hp1 others(3): Show |
a0001a0002 | a0001c0003a0002c0002 | a0001c0003t0001a0002c0002t0001 | a0001c0003t0001g0004 a0002c0002t0001g0102 a0002c0002t0001g0115 others(3): Show |
6 | 304 | 0.0197 | -6 | c.-98 others(21): Show |
SCAP | ENSG00000114650.21 | transcript | ENST00000265565.10 | protein_coding | 1/22 | chr3 | TogoVar | |||||||
SCAP_chr3_47408681_47480941 | 47455062 | CATATAT | C | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00558.hp1 others(47): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0107 a0001c0001t0001g0181 a0001c0001t0001g0182 others(47): Show |
50 | 304 | 0.1645 | -6 | c.-98 others(25): Show |
SCAP | ENSG00000114650.21 | transcript | ENST00000265565.10 | protein_coding | 1/22 | chr3 | TogoVar | |||||||
SCARA3_chr8_27628902_27678018 | 27644621 | GGAGAGA | G | intron_variant | MODIFIER | HG01884.hp1 HG02451.hp2 HG02615.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0018 | a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0301 others(2): Show |
5 | 408 | 0.0123 | -6 | c.8-5 others(19): Show |
SCARA3 | ENSG00000168077.14 | transcript | ENST00000301904.4 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SCARA3_chr8_27628902_27678018 | 27646963 | ACCGCCC | A | intron_variant | MODIFIER | HG00408.hp1 HG01099.hp1 HG01099.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0007a0001c0001t0015others(2): Show | a0001c0001t0003g0111 a0001c0001t0003g0112 a0001c0001t0003g0122 others(15): Show |
18 | 408 | 0.0441 | -6 | c.8-2 others(19): Show |
SCARA3 | ENSG00000168077.14 | transcript | ENST00000301904.4 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SCARA3_chr8_27628902_27678018 | 27659874 | AAAAGAG | A | intron_variant | MODIFIER | HG01496.hp1 NA18947.hp1 NA18962.hp1 others(6): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0006 | a0001c0001t0001a0001c0001t0009a0001c0001t0040others(2): Show | a0001c0001t0001g0028 a0001c0001t0001g0088 a0001c0001t0009g0056 others(6): Show |
9 | 408 | 0.0221 | -6 | c.136 others(23): Show |
SCARA3 | ENSG00000168077.14 | transcript | ENST00000301904.4 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SCARA5_chr8_27864883_27997673 | 27865577 | TTATATA | T | downstream_gene_variant | MODIFIER | HG00733.hp1 HG01071.hp2 HG01081.hp1 others(30): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0004others(12): Show | a0001c0001t0005a0001c0001t0032a0001c0001t0041others(19): Show | a0001c0001t0005g0174 a0001c0001t0005g0225 a0001c0001t0005g0250 others(30): Show |
33 | 314 | 0.1051 | -6 | c.*63 others(17): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 4305 | chr8 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27865787 | ATTTTTT | A | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00597.hp1 HG00735.hp2 others(22): Show |
a0001a0002a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0001a0001c0002t0043a0001c0004t0003others(9): Show | a0001c0001t0001g0131 a0001c0002t0043g0102 a0001c0004t0003g0146 others(22): Show |
25 | 314 | 0.0796 | -6 | c.*61 others(17): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 4095 | chr8 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27941797 | CATCATT | C | intron_variant | MODIFIER | HG02258.hp1 HG02559.hp1 HG02723.hp2 others(8): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0013a0001c0001t0024a0001c0003t0002others(6): Show | a0001c0001t0013g0310 a0001c0001t0024g0134 a0001c0003t0002g0012 others(8): Show |
11 | 314 | 0.0350 | -6 | c.242 others(25): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 3/8 | chr8 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27941800 | CATTATT | C | intron_variant | MODIFIER | HG01243.hp1 HG02280.hp1 HG02717.hp1 others(5): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0005a0001c0002t0051a0001c0003t0042others(4): Show | a0001c0001t0005g0203 a0001c0002t0051g0113 a0001c0003t0042g0009 others(5): Show |
8 | 314 | 0.0255 | -6 | c.242 others(25): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 3/8 | chr8 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124773576 | ACACACC | A | downstream_gene_variant | MODIFIER | HG01109.hp1 HG01515.hp2 HG01934.hp2 others(23): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(12): Show | a0001c0001t0001g0176 a0001c0001t0002g0309 a0001c0001t0004g0042 others(23): Show |
26 | 356 | 0.0730 | -6 | c.*50 others(17): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 3279 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124783661 | GGAGGCT | G | intron_variant | MODIFIER | HG01943.hp1 HG02622.hp1 HG03516.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005 | a0001c0001t0003g0239 a0001c0001t0005g0043 a0001c0001t0005g0047 others(1): Show |
4 | 356 | 0.0112 | -6 | c.140 others(23): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 11/12 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124817020 | ATGTGTG | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(97): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0105 others(96): Show |
100 | 356 | 0.2809 | -6 | c.284 others(21): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 2/12 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124817128 | GTGTGTA | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(127): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0050 others(127): Show |
130 | 356 | 0.3652 | -6 | c.284 others(21): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 2/12 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124837517 | AAGAAAG | A | intron_variant | MODIFIER | HG01243.hp1 HG01256.hp1 HG01891.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0004a0001c0001t0016a0001c0002t0001others(3): Show | a0001c0001t0004g0121 a0001c0001t0016g0240 a0001c0002t0001g0143 others(10): Show |
13 | 356 | 0.0365 | -6 | c.127 others(25): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 1/12 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124837538 | GAAAAGA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00639.hp2 others(35): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0040 a0001c0001t0001g0067 a0001c0001t0001g0112 others(35): Show |
38 | 356 | 0.1067 | -6 | c.127 others(25): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 1/12 | chr12 | TogoVar | |||||||
SCARB1_chr12_124771856_124868864 | 124837588 | GAAAAGA | G | intron_variant | MODIFIER | HG00099.hp1 HG01081.hp2 HG01257.hp2 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(7): Show | a0001c0001t0001g0034 a0001c0001t0001g0111 a0001c0001t0001g0184 others(13): Show |
16 | 356 | 0.0449 | -6 | c.127 others(25): Show |
SCARB1 | ENSG00000073060.17 | transcript | ENST00000261693.11 | protein_coding | 1/12 | chr12 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76170945 | AATATAT | A | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00423.hp1 others(78): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(17): Show | a0001c0001t0001g0017 a0001c0001t0001g0049 a0001c0001t0001g0052 others(63): Show |
81 | 384 | 0.2109 | -6 | c.995 others(21): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 7/11 | chr4 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76179028 | GGTTTTT | G | intron_variant | MODIFIER | HG00673.hp2 HG02083.hp1 HG02559.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0001t0010a0001c0002t0009others(1): Show | a0001c0001t0009g0004 a0001c0001t0009g0033 a0001c0001t0009g0208 others(10): Show |
19 | 384 | 0.0495 | -6 | c.612 others(21): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 4/11 | chr4 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76189474 | CTGTTGT | C | intron_variant | MODIFIER | HG01106.hp1 HG01123.hp1 HG01175.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0026 a0001c0001t0001g0114 a0001c0001t0001g0115 others(2): Show |
6 | 384 | 0.0156 | -6 | c.275 others(23): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 2/11 | chr4 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76198837 | AGTGAGT | A | intron_variant | MODIFIER | HG02559.hp2 HG03453.hp2 NA18906.hp2 |
a0001 | a0001c0002a0001c0008 | a0001c0002t0009a0001c0008t0012 | a0001c0002t0009g0175 a0001c0002t0009g0176 a0001c0008t0012g0197 |
3 | 384 | 0.0078 | -6 | c.118 others(23): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 1/11 | chr4 | TogoVar | |||||||
SCARB2_chr4_76153737_76218824 | 76198841 | AGTGTGT | A | intron_variant | MODIFIER | HG03490.hp1 HG03491.hp2 HG03654.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0018 a0001c0001t0003g0072 a0001c0001t0003g0086 |
4 | 384 | 0.0104 | -6 | c.118 others(23): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 1/11 | chr4 | TogoVar | |||||||
SCARF2_chr22_20419584_20442825 | 20421202 | GGTGTGT | G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(160): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0002c0007others(3): Show | a0001c0001t0002a0002c0002t0001a0002c0002t0008others(5): Show | a0001c0001t0002g0054 a0001c0001t0002g0070 a0002c0002t0001g0002 others(45): Show |
163 | 402 | 0.4055 | -6 | c.*41 others(17): Show |
SCARF2 | ENSG00000244486.9 | transcript | ENST00000622235.5 | protein_coding | 3381 | chr22 | TogoVar | |||||||
SCART1_chr10_133448945_133474760 | 133449757 | CAAAAAA | C | upstream_gene_variant | MODIFIER | HG02258.hp1 HG02630.hp2 HG02723.hp2 others(4): Show |
a0004 | a0004c0005 | a0004c0005t0003 | a0004c0005t0003g0027 a0004c0005t0003g0036 a0004c0005t0003g0054 others(1): Show |
7 | 434 | 0.0161 | -6 | c.-42 others(17): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 4187 | chr10 | TogoVar | |||||||
SCART1_chr10_133448945_133474760 | 133460471 | CATATAT | C | intron_variant | MODIFIER | HG02055.hp1 HG02258.hp1 HG02615.hp2 others(8): Show |
a0003a0004a0009 | a0003c0009a0004c0005a0009c0025 | a0003c0009t0003a0004c0005t0003a0009c0025t0003 | a0003c0009t0003g0120 a0004c0005t0003g0027 a0004c0005t0003g0036 others(4): Show |
11 | 434 | 0.0254 | -6 | c.196 others(23): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SCCPDH_chr1_246719409_246773137 | 246721723 | AATTTTT | A | upstream_gene_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(15): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0002a0001c0001t0003a0001c0001t0010others(2): Show | a0001c0001t0002g0161 a0001c0001t0003g0010 a0001c0001t0003g0140 others(12): Show |
18 | 410 | 0.0439 | -6 | c.-26 others(17): Show |
SCCPDH | ENSG00000143653.10 | transcript | ENST00000366510.4 | protein_coding | 2685 | chr1 | TogoVar | |||||||
SCCPDH_chr1_246719409_246773137 | 246721724 | ATTTTTT | A | upstream_gene_variant | MODIFIER | HG01884.hp1 HG02717.hp2 HG03130.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0008 | a0001c0001t0001g0056 a0001c0001t0002g0055 a0001c0001t0002g0253 others(2): Show |
7 | 410 | 0.0171 | -6 | c.-26 others(17): Show |
SCCPDH | ENSG00000143653.10 | transcript | ENST00000366510.4 | protein_coding | 2684 | chr1 | TogoVar |