view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCHIP1_chr3_159268244_159902359 | 159432335 | TGTGTGA | T | intron_variant | MODIFIER | HG01169.hp1 HG02622.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0003 | a0001c0001t0001g0093 a0001c0002t0003g0083 |
2 | 100 | 0.0200 | -6 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159432339 | TGAGAGA | T | intron_variant | MODIFIER | HG02486.hp2 HG03225.hp2 NA19030.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0060 a0001c0002t0001g0029 a0001c0002t0001g0061 |
3 | 100 | 0.0300 | -6 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159465315 | TTGTGTG | T | intron_variant | MODIFIER | HG03540.hp2 HG03579.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0001 | a0001c0001t0001g0073 a0002c0003t0001g0091 |
2 | 100 | 0.0200 | -6 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159517166 | TTTACTC | T | intron_variant | MODIFIER | HG02451.hp1 HG02886.hp1 HG02897.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0002 | a0001c0001t0001g0075 a0001c0002t0001g0022 a0001c0002t0002g0047 |
3 | 100 | 0.0300 | -6 | c.63+ others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159543117 | GTATATA | G | intron_variant | MODIFIER | HG02451.hp2 HG02717.hp1 HG02965.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0035 a0001c0001t0001g0050 a0001c0002t0001g0074 others(1): Show |
4 | 100 | 0.0400 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159553967 | CGTGTGT | C | intron_variant | MODIFIER | HG02055.hp1 HG02451.hp1 HG02572.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0025 others(9): Show |
12 | 100 | 0.1200 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159582785 | TATACAC | T | intron_variant | MODIFIER | HG02055.hp1 HG02451.hp1 HG02630.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0004 a0001c0001t0001g0035 a0001c0001t0001g0045 others(6): Show |
9 | 100 | 0.0900 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159590582 | AATAAAT | A | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG01243.hp1 others(51): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(3): Show | a0001c0001t0001g0004 a0001c0001t0001g0016 a0001c0001t0001g0023 others(51): Show |
54 | 100 | 0.5400 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626091 | TAGATAG | T | intron_variant | MODIFIER | HG02451.hp2 HG02486.hp1 HG02622.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0003 | a0001c0001t0001g0050 a0001c0002t0001g0039 a0001c0002t0001g0058 others(3): Show |
6 | 100 | 0.0600 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159626103 | TAGATAG | T | intron_variant | MODIFIER | HG02622.hp1 HG02886.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0031 a0001c0002t0002g0047 |
2 | 100 | 0.0200 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159627579 | CCTAAGT | C | intron_variant | MODIFIER | HG01884.hp2 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 a0001c0001t0001g0077 |
2 | 100 | 0.0200 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159637371 | CCACACA | C | intron_variant | MODIFIER | HG01891.hp2 HG02486.hp2 HG02572.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0016 a0001c0001t0001g0040 a0001c0001t0001g0060 others(4): Show |
7 | 100 | 0.0700 | -6 | c.64- others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159722596 | CATGTGT | C | intron_variant | MODIFIER | HG01255.hp1 HG02897.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0044 a0001c0002t0001g0022 |
2 | 100 | 0.0200 | -6 | c.64- others(23): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159828370 | TATATAC | T | intron_variant | MODIFIER | NA18906.hp1 NA19043.hp1 NA20300.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0036 a0001c0001t0001g0063 a0001c0001t0001g0094 |
3 | 100 | 0.0300 | -6 | c.760 others(25): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159864470 | TACACAC | T | intron_variant | MODIFIER | HG02027.hp1 HG02055.hp2 HG02451.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0020 others(6): Show |
9 | 100 | 0.0900 | -6 | c.760 others(23): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159900597 | TCTCTCA | T | downstream_gene_variant | MODIFIER | HG01891.hp1 HG01891.hp2 HG03225.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0040 a0001c0001t0001g0068 a0001c0002t0001g0033 others(1): Show |
4 | 100 | 0.0400 | -6 | c.*38 others(17): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 3239 | chr3 | TogoVar | |||||||
SCIMP_chr17_5203920_5239860 | 5217380 | TTGTGTG | T | intron_variant | MODIFIER | HG00544.hp2 HG00621.hp1 HG00673.hp1 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0112 others(40): Show |
46 | 386 | 0.1192 | -6 | c.210 others(23): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 3/4 | chr17 | TogoVar | |||||||
SCIMP_chr17_5203920_5239860 | 5227292 | AACACAC | A | intron_variant | MODIFIER | HG01123.hp2 HG01358.hp2 HG01884.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0003 | a0001c0001t0001g0118 a0001c0001t0001g0145 a0001c0001t0001g0255 others(6): Show |
9 | 386 | 0.0233 | -6 | c.22- others(21): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | |||||||
SCIMP_chr17_5203920_5239860 | 5238118 | GTTTGTT | G | upstream_gene_variant | MODIFIER | HG01517.hp1 HG03130.hp2 NA19043.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0002t0003 | a0001c0001t0001g0150 a0001c0001t0004g0146 a0001c0002t0003g0011 |
3 | 386 | 0.0078 | -6 | c.-33 others(17): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 3259 | chr17 | TogoVar | |||||||
SCIN_chr7_12565720_12665182 | 12569183 | GACACAC | G | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00544.hp2 others(49): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0002a0002c0003others(8): Show | a0001c0001t0001a0001c0001t0042a0001c0001t0049others(46): Show | a0001c0001t0001g0123 a0001c0001t0042g0178 a0001c0001t0049g0080 others(49): Show |
52 | 372 | 0.1398 | -6 | c.-16 others(17): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 1536 | chr7 | TogoVar | |||||||
SCIN_chr7_12565720_12665182 | 12588833 | GTGGGAA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp1 others(77): Show |
a0001a0002a0007others(5): Show | a0001c0001a0002c0002a0002c0003others(7): Show | a0001c0001t0012a0002c0002t0001a0002c0002t0004others(72): Show | a0001c0001t0012g0084 a0002c0002t0001g0253 a0002c0002t0001g0310 others(77): Show |
80 | 372 | 0.2151 | -6 | c.516 others(23): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 3/15 | chr7 | TogoVar | |||||||
SCIN_chr7_12565720_12665182 | 12588834 | TGGGAAG | T | intron_variant | MODIFIER | HG00099.hp1 HG00597.hp2 HG00741.hp2 others(14): Show |
a0001a0002a0004 | a0001c0001a0002c0003a0002c0019others(1): Show | a0001c0001t0009a0001c0001t0021a0001c0001t0036others(14): Show | a0001c0001t0009g0009 a0001c0001t0021g0033 a0001c0001t0036g0011 others(14): Show |
17 | 372 | 0.0457 | -6 | c.516 others(23): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SCIN_chr7_12565720_12665182 | 12628032 | CGTGTGT | C | intron_variant | MODIFIER | HG02257.hp1 HG02572.hp1 HG02622.hp2 others(9): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0003a0002c0014others(2): Show | a0001c0001t0074a0001c0001t0206a0001c0001t0274others(8): Show | a0001c0001t0074g0131 a0001c0001t0206g0108 a0001c0001t0274g0202 others(9): Show |
12 | 372 | 0.0323 | -6 | c.119 others(25): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 8/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SCLT1_chr4_128878993_129098539 | 128894363 | AACACAC | A | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp1 HG00738.hp1 others(46): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0011others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0011t0010others(5): Show | a0001c0001t0001g0267 a0001c0002t0001g0274 a0001c0011t0010g0284 others(46): Show |
49 | 288 | 0.1701 | -6 | c.183 others(25): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 18/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 128911191 | GGGAGGC | G | intron_variant | MODIFIER | HG01167.hp1 HG01168.hp2 HG01169.hp2 others(2): Show |
a0001a0002a0006 | a0001c0002a0002c0006a0002c0009others(1): Show | a0001c0002t0001a0002c0006t0001a0002c0009t0001others(1): Show | a0001c0002t0001g0272 a0002c0006t0001g0182 a0002c0006t0001g0183 others(2): Show |
5 | 288 | 0.0174 | -6 | c.183 others(27): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 18/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 129039898 | GCGCACA | G | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00423.hp1 others(74): Show |
a0001a0002a0005 | a0001c0001a0001c0008a0002c0003others(1): Show | a0001c0001t0001a0001c0008t0001a0002c0003t0001others(1): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(71): Show |
77 | 288 | 0.2674 | -6 | c.235 others(21): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 4/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 129039900 | GCACACA | G | intron_variant | MODIFIER | HG00280.hp1 HG02056.hp1 HG02080.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0002c0003t0001 | a0001c0001t0001g0247 a0001c0002t0001g0040 a0001c0002t0001g0043 others(20): Show |
23 | 288 | 0.0799 | -6 | c.235 others(21): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 4/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 129086313 | GTATATA | G | intron_variant | MODIFIER | HG00140.hp2 HG00735.hp2 HG01074.hp2 others(21): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(4): Show | a0001c0001t0001g0016 a0001c0001t0001g0256 a0001c0001t0003g0001 others(20): Show |
24 | 288 | 0.0833 | -6 | c.35- others(21): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 1/20 | chr4 | TogoVar | |||||||
SCLY_chr2_238056001_238104413 | 238060579 | GCGGCCC | G | upstream_gene_variant | MODIFIER | HG01081.hp1 HG01167.hp2 HG01169.hp1 others(18): Show |
a0003 | a0003c0006a0003c0008a0003c0018 | a0003c0006t0007a0003c0006t0059a0003c0006t0155others(4): Show | a0003c0006t0007g0037 a0003c0006t0007g0294 a0003c0006t0007g0295 others(14): Show |
21 | 392 | 0.0536 | -6 | c.-47 others(15): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 421 | chr2 | TogoVar | |||||||
SCLY_chr2_238056001_238104413 | 238076733 | AAAAAAG | A | intron_variant | MODIFIER | HG02055.hp2 HG02258.hp1 HG02451.hp2 others(9): Show |
a0003 | a0003c0006 | a0003c0006t0007a0003c0006t0059a0003c0006t0155 | a0003c0006t0007g0037 a0003c0006t0007g0294 a0003c0006t0007g0295 others(7): Show |
12 | 392 | 0.0306 | -6 | c.485 others(23): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCLY_chr2_238056001_238104413 | 238103434 | AAAGAAG | A | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00558.hp2 others(141): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(5): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0010others(56): Show | a0001c0001t0004g0007 a0001c0001t0004g0008 a0001c0001t0004g0027 others(119): Show |
144 | 392 | 0.3674 | -6 | c.*50 others(17): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 4022 | chr2 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41041432 | TATTATA | T | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00609.hp2 others(42): Show |
a0001a0003a0005 | a0001c0001a0003c0005a0005c0003 | a0001c0001t0002a0001c0001t0006a0003c0005t0006others(1): Show | a0001c0001t0002g0007 a0001c0001t0002g0067 a0001c0001t0002g0068 others(42): Show |
45 | 304 | 0.1480 | -6 | c.149 others(25): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 12/15 | chr1 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41200497 | GTAATAA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00735.hp1 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0109 a0001c0001t0003g0111 a0001c0001t0003g0112 others(27): Show |
30 | 304 | 0.0987 | -6 | c.-11 others(27): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 1/15 | chr1 | TogoVar | |||||||
SCML1_chrX_17732493_17759985 | 17737422 | GCCCCCC | G | upstream_gene_variant | MODIFIER | HG00597.hp1 HG00597.hp2 HG00639.hp1 others(75): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(30): Show |
78 | 281 | 0.2776 | -6 | c.-37 others(15): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 70 | chrX | TogoVar | |||||||
SCML1_chrX_17732493_17759985 | 17739731 | GCTAACT | G | intron_variant | MODIFIER | NA19067.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0028 | 1 | 281 | 0.0036 | -6 | c.-11 others(25): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 1/7 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18264431 | TTGTGTG | T | intron_variant | MODIFIER | HG00280.hp1 HG00738.hp1 HG01106.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0099 others(15): Show |
19 | 247 | 0.0769 | -6 | c.948 others(23): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 8/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18311398 | CAGAGAG | C | intron_variant | MODIFIER | HG00323.hp2 HG00544.hp1 HG00597.hp1 others(83): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0001g0164 a0001c0001t0001g0225 a0001c0001t0001g0235 others(83): Show |
86 | 247 | 0.3482 | -6 | c.487 others(23): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 6/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18312978 | CGTGTGT | C | intron_variant | MODIFIER | HG01257.hp1 HG01258.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0220 a0001c0002t0001g0221 |
2 | 247 | 0.0081 | -6 | c.486 others(23): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 6/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18313002 | TGTGTGC | T | intron_variant | MODIFIER | HG03225.hp1 NA19064.hp2 |
a0001a0002 | a0001c0002a0002c0007 | a0001c0002t0001a0002c0007t0001 | a0001c0002t0001g0023 a0002c0007t0001g0219 |
2 | 247 | 0.0081 | -6 | c.486 others(23): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 6/14 | chrX | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107717143 | CAAAAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00544.hp1 others(80): Show |
a0001a0002a0004 | a0001c0001a0001c0005a0002c0004others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(14): Show | a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0093 others(80): Show |
83 | 250 | 0.3320 | -6 | c.973 others(23): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 6/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107754324 | CATGGGA | C | intron_variant | MODIFIER | NA18942.hp1 NA18942.hp2 NA19076.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0023others(1): Show | a0001c0001t0002g0206 a0001c0001t0004g0233 a0001c0001t0023g0112 others(1): Show |
4 | 250 | 0.0160 | -6 | c.157 others(23): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 2/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107802683 | TCCCTCC | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00438.hp1 others(170): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(42): Show | a0001c0001t0001g0010 a0001c0001t0001g0064 a0001c0001t0001g0070 others(170): Show |
173 | 250 | 0.6920 | -6 | c.-60 others(25): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107813419 | TATATAA | T | intron_variant | MODIFIER | HG01346.hp2 HG01433.hp2 HG01891.hp2 others(10): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0070 a0001c0001t0002g0231 a0001c0001t0003g0021 others(10): Show |
13 | 250 | 0.0520 | -6 | c.-60 others(25): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107817630 | AAAAAAG | A | intron_variant | MODIFIER | HG00621.hp1 HG00639.hp1 HG00735.hp2 others(35): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0082 a0001c0001t0001g0091 a0001c0001t0001g0097 others(35): Show |
38 | 250 | 0.1520 | -6 | c.-60 others(23): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107824462 | CTGTGTG | C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00544.hp2 HG00642.hp1 others(39): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(15): Show | a0001c0001t0001g0010 a0001c0001t0001g0170 a0001c0001t0002g0167 others(39): Show |
42 | 250 | 0.1680 | -6 | c.-40 others(15): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 150 | chr6 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38730664 | GATAACA | G | intron_variant | MODIFIER | HG01081.hp1 HG01496.hp2 NA20752.hp1 |
a0002 | a0002c0001a0002c0067 | a0002c0001t0001a0002c0067t0001 | a0002c0001t0001g0166 a0002c0001t0001g0169 a0002c0067t0001g0236 |
3 | 372 | 0.0081 | -6 | c.228 others(25): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38741289 | AACACAC | A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00597.hp1 others(37): Show |
a0001a0004a0005others(2): Show | a0001c0003a0001c0007a0004c0005others(7): Show | a0001c0003t0001a0001c0003t0002a0001c0007t0001others(9): Show | a0001c0003t0001g0061 a0001c0003t0001g0091 a0001c0003t0001g0295 others(37): Show |
40 | 372 | 0.1075 | -6 | c.210 others(24): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 14/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38746063 | GTATATA | G | intron_variant | MODIFIER | HG01891.hp2 HG02559.hp1 HG02976.hp2 others(5): Show |
a0001a0003 | a0001c0003a0001c0007a0003c0002 | a0001c0003t0001a0001c0003t0004a0001c0007t0001others(2): Show | a0001c0003t0001g0122 a0001c0003t0004g0120 a0001c0007t0001g0117 others(5): Show |
8 | 372 | 0.0215 | -6 | c.186 others(25): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 13/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38761837 | TGAGAGA | T | intron_variant | MODIFIER | HG01109.hp1 HG01243.hp2 HG01884.hp1 others(10): Show |
a0001a0002a0019 | a0001c0003a0001c0007a0002c0012others(1): Show | a0001c0003t0002a0001c0007t0001a0002c0012t0001others(1): Show | a0001c0003t0002g0096 a0001c0003t0002g0097 a0001c0003t0002g0098 others(10): Show |
13 | 372 | 0.0350 | -6 | c.692 others(21): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 6/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38772708 | GCAACAA | G | intron_variant | MODIFIER | HG02717.hp2 HG02965.hp2 HG04228.hp1 others(1): Show |
a0001a0005a0006 | a0001c0003a0005c0013a0006c0016 | a0001c0003t0001a0005c0013t0001a0006c0016t0001 | a0001c0003t0001g0077 a0001c0003t0001g0078 a0005c0013t0001g0074 others(1): Show |
4 | 372 | 0.0108 | -6 | c.471 others(23): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 4/27 | chr3 | TogoVar |