view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SGCZ_chr8_14079845_15243431 | 15127255 | CAAACAA | C | intron_variant | MODIFIER | HG02886.hp2 NA19240.hp1 |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0050 | a0001c0001t0021g0015 a0001c0001t0050g0045 |
2 | 102 | 0.0196 | -6 | c.39+ others(25): Show |
SGCZ | ENSG00000185053.14 | transcript | ENST00000382080.6 | protein_coding | 1/7 | chr8 | TogoVar | |||||||
SGCZ_chr8_14079845_15243431 | 15194185 | TCACACA | T | intron_variant | MODIFIER | HG01243.hp2 HG02055.hp1 HG02109.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0013a0001c0001t0014others(11): Show | a0001c0001t0001g0076 a0001c0001t0013g0026 a0001c0001t0014g0024 others(11): Show |
14 | 102 | 0.1373 | -6 | c.39+ others(23): Show |
SGCZ | ENSG00000185053.14 | transcript | ENST00000382080.6 | protein_coding | 1/7 | chr8 | TogoVar | |||||||
SGIP1_chr1_66529153_66756139 | 66530955 | AAAAAAG | A | upstream_gene_variant | MODIFIER | HG01070.hp1 HG02735.hp1 HG03490.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0019others(2): Show | a0001c0001t0001g0032 a0001c0001t0002g0035 a0001c0001t0002g0044 others(5): Show |
8 | 302 | 0.0265 | -6 | c.-34 others(17): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 3197 | chr1 | TogoVar | |||||||
SGIP1_chr1_66529153_66756139 | 66577756 | CTGTGTG | C | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp2 HG00597.hp1 others(64): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0237 a0001c0001t0002g0004 a0001c0001t0002g0005 others(64): Show |
67 | 302 | 0.2219 | -6 | c.10+ others(23): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66589163 | CATATAT | C | intron_variant | MODIFIER | HG00597.hp2 HG01106.hp2 HG01109.hp1 others(7): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0152 a0001c0001t0002g0206 a0001c0001t0005g0213 others(7): Show |
10 | 302 | 0.0331 | -6 | c.11- others(23): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66592897 | CTTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG01074.hp2 HG03225.hp2 others(5): Show |
a0001a0007 | a0001c0001a0001c0004a0007c0015 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0138 a0001c0001t0002g0096 a0001c0001t0004g0002 others(5): Show |
8 | 302 | 0.0265 | -6 | c.11- others(23): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66637449 | GTGTGTT | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00408.hp2 others(70): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0004a0001c0007others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0066 a0001c0001t0001g0070 a0001c0001t0001g0076 others(70): Show |
73 | 302 | 0.2417 | -6 | c.171 others(23): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 4/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66660136 | GAAAGAA | G | intron_variant | MODIFIER | HG00099.hp2 HG00621.hp1 HG00642.hp1 others(39): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0045others(19): Show | a0001c0001t0001g0080 a0001c0001t0001g0132 a0001c0001t0002g0005 others(39): Show |
42 | 302 | 0.1391 | -6 | c.460 others(21): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 7/24 | chr1 | TogoVar | |||||||
SGIP1_chr1_66529153_66756139 | 66660203 | GAAAGAA | G | intron_variant | MODIFIER | HG01515.hp1 HG02083.hp2 HG02132.hp2 others(5): Show |
a0002 | a0002c0002a0002c0003 | a0002c0002t0001a0002c0002t0003a0002c0002t0050others(1): Show | a0002c0002t0001g0275 a0002c0002t0003g0281 a0002c0002t0003g0290 others(5): Show |
8 | 302 | 0.0265 | -6 | c.460 others(21): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 7/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66660209 | AAGAAAG | A | intron_variant | MODIFIER | HG02523.hp1 NA18950.hp2 NA19006.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0045 | a0001c0001t0001g0132 a0001c0001t0002g0005 a0001c0001t0045g0006 |
3 | 302 | 0.0099 | -6 | c.460 others(21): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 7/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66683700 | CTTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00438.hp2 others(39): Show |
a0001a0002a0007 | a0001c0001a0001c0004a0001c0007others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(11): Show | a0001c0001t0001g0070 a0001c0001t0001g0085 a0001c0001t0001g0089 others(39): Show |
42 | 302 | 0.1391 | -6 | c.131 others(25): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 15/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SGIP1_chr1_66529153_66756139 | 66750034 | GGGGTGT | G | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00609.hp2 others(78): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0004a0001c0014others(4): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0014others(12): Show | a0001c0001t0001g0003 a0001c0001t0001g0032 a0001c0001t0001g0066 others(78): Show |
81 | 302 | 0.2682 | -6 | c.*69 others(17): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 25/25 | 6941 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SGIP1_chr1_66529153_66756139 | 66750036 | GGTGTGT | G | 3_prime_UTR_variant | MODIFIER | HG02145.hp2 HG02258.hp2 HG02615.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003 | a0001c0001t0028a0002c0002t0009a0002c0003t0051 | a0001c0001t0028g0258 a0001c0001t0028g0302 a0002c0002t0009g0011 others(6): Show |
9 | 302 | 0.0298 | -6 | c.*69 others(17): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 25/25 | 6968 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SGK1_chr6_134164256_134323112 | 134208768 | ATATGTG | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(142): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0020 others(142): Show |
145 | 250 | 0.5800 | -6 | c.286 others(23): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134212053 | TTTTTTG | T | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp2 HG00741.hp1 others(26): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0048 a0001c0001t0001g0066 a0001c0001t0001g0071 others(26): Show |
29 | 250 | 0.1160 | -6 | c.286 others(23): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134220058 | CAAAAAA | C | intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG02523.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0051 a0001c0001t0001g0124 a0001c0001t0001g0152 others(7): Show |
10 | 250 | 0.0400 | -6 | c.286 others(25): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134233071 | CCTCTAT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(174): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 others(174): Show |
177 | 250 | 0.7080 | -6 | c.286 others(25): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134241048 | CTTTTTT | C | intron_variant | MODIFIER | HG01258.hp1 HG01517.hp1 HG01884.hp1 others(9): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(2): Show | a0001c0001t0001g0016 a0001c0001t0001g0088 a0001c0001t0001g0102 others(9): Show |
12 | 250 | 0.0480 | -6 | c.285 others(25): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134283873 | CAAAAAA | C | intron_variant | MODIFIER | HG00558.hp2 HG00597.hp1 HG00621.hp1 others(18): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0011a0001c0002t0001others(2): Show | a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0026 others(18): Show |
21 | 250 | 0.0840 | -6 | c.70- others(23): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 1/13 | chr6 | TogoVar | |||||||
SGK1_chr6_134164256_134323112 | 134320648 | CTGTGTG | C | upstream_gene_variant | MODIFIER | HG01074.hp1 HG01099.hp2 HG03098.hp2 others(2): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0006t0004 | a0001c0001t0001g0178 a0001c0001t0001g0224 a0001c0001t0002g0082 others(2): Show |
5 | 250 | 0.0200 | -6 | c.-31 others(17): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2537 | chr6 | TogoVar | |||||||
SGK2_chr20_43554027_43590627 | 43571064 | GGTGTGT | G | intron_variant | MODIFIER | HG00280.hp1 HG02165.hp2 HG02895.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0019 a0001c0001t0001g0034 others(2): Show |
7 | 416 | 0.0168 | -6 | c.510 others(19): Show |
SGK2 | ENSG00000101049.18 | transcript | ENST00000373100.7 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66711089 | CTGTGTG | C | upstream_gene_variant | MODIFIER | HG01175.hp2 HG02145.hp1 HG02258.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0005 | a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0103 others(3): Show |
6 | 142 | 0.0423 | -6 | c.-18 others(17): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1691 | chr8 | TogoVar | |||||||
SGK3_chr8_66707781_66867022 | 66744483 | GTATATA | G | intron_variant | MODIFIER | HG02630.hp1 HG03579.hp1 NA18982.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0115 |
3 | 142 | 0.0211 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66749932 | GGTGTGT | G | intron_variant | MODIFIER | HG02738.hp1 HG03017.hp2 HG03669.hp2 others(12): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0039 others(12): Show |
15 | 142 | 0.1056 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66749961 | GTGTGTA | G | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG02559.hp1 others(5): Show |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0013 a0001c0002t0003g0019 a0001c0002t0003g0020 others(5): Show |
8 | 142 | 0.0563 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66768100 | TACTTAC | T | intron_variant | MODIFIER | HG00741.hp2 HG01070.hp2 HG01071.hp1 others(62): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0003a0001c0002t0004others(7): Show | a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0005 others(62): Show |
65 | 142 | 0.4578 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66777757 | CAACATG | C | intron_variant | MODIFIER | HG02486.hp2 HG03139.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0003 a0001c0002t0002g0004 |
2 | 142 | 0.0141 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66779561 | AATATAT | A | intron_variant | MODIFIER | HG01081.hp1 HG02818.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0091 a0001c0001t0001g0100 |
2 | 142 | 0.0141 | -6 | c.-12 others(27): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66796321 | ATTTTTT | A | intron_variant | MODIFIER | HG02258.hp2 HG02486.hp2 HG02615.hp2 others(25): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0005a0001c0002t0006others(1): Show | a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0022 others(25): Show |
28 | 142 | 0.1972 | -6 | c.97- others(21): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 2/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66836771 | CTTTTTT | C | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG02559.hp1 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0013 a0001c0002t0003g0018 a0001c0002t0003g0019 others(6): Show |
9 | 142 | 0.0634 | -6 | c.741 others(21): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66839498 | GATATAT | G | intron_variant | MODIFIER | HG01261.hp2 HG02523.hp1 HG02523.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(4): Show |
7 | 142 | 0.0493 | -6 | c.742 others(21): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGK3_chr8_66707781_66867022 | 66857793 | GTGTGTA | G | intron_variant | MODIFIER | HG01981.hp2 HG02630.hp1 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0095 a0001c0001t0001g0130 |
3 | 142 | 0.0211 | -6 | c.132 others(25): Show |
SGK3 | ENSG00000104205.16 | transcript | ENST00000521198.7 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SGMS1_chr10_50300600_50628956 | 50400396 | CATATAT | C | intron_variant | MODIFIER | HG00140.hp1 HG01358.hp2 HG02074.hp2 others(13): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(1): Show | a0001c0001t0001g0047 a0001c0001t0001g0060 a0001c0001t0001g0122 others(13): Show |
16 | 312 | 0.0513 | -6 | c.-23 others(27): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 6/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50429736 | CACACAT | C | intron_variant | MODIFIER | HG01123.hp2 HG01167.hp2 HG01192.hp2 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(3): Show | a0001c0001t0001g0038 a0001c0001t0001g0060 a0001c0001t0001g0063 others(12): Show |
15 | 312 | 0.0481 | -6 | c.-23 others(25): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 6/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50458339 | CTTTTTT | C | intron_variant | MODIFIER | HG00099.hp2 HG01261.hp2 HG01517.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0004a0001c0002t0001a0001c0002t0002others(2): Show | a0001c0001t0004g0011 a0001c0002t0001g0282 a0001c0002t0001g0290 others(5): Show |
8 | 312 | 0.0256 | -6 | c.-31 others(25): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 5/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50511248 | TACACAC | T | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG01981.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0002t0004 | a0001c0001t0001g0086 a0001c0001t0004g0009 a0001c0001t0004g0011 others(5): Show |
8 | 312 | 0.0256 | -6 | c.-49 others(25): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 3/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50532225 | CTGTGTG | C | intron_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG01074.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0136 a0001c0001t0001g0168 a0001c0001t0001g0250 others(9): Show |
12 | 312 | 0.0385 | -6 | c.-58 others(27): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 2/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50587633 | ATGTGTG | A | intron_variant | MODIFIER | HG01069.hp1 HG01192.hp1 HG01243.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 others(12): Show |
15 | 312 | 0.0481 | -6 | c.-58 others(25): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 2/10 | chr10 | TogoVar | |||||||
SGMS1_chr10_50300600_50628956 | 50604854 | GAAATAT | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00408.hp2 others(159): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0020 others(159): Show |
162 | 312 | 0.5192 | -6 | c.-68 others(27): Show |
SGMS1 | ENSG00000198964.14 | transcript | ENST00000361781.7 | protein_coding | 1/10 | chr10 | TogoVar | |||||||
SGMS2_chr4_107819932_107920047 | 107825620 | CTTTTTT | C | intron_variant | MODIFIER | HG01175.hp1 HG01361.hp2 HG01934.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014a0001c0001t0017 | a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0014 others(16): Show |
19 | 270 | 0.0704 | -6 | c.-32 others(23): Show |
SGMS2 | ENSG00000164023.15 | transcript | ENST00000690982.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SGO1_chr3_20164484_20191206 | 20184808 | CTATACT | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(122): Show |
a0001a0007 | a0001c0002a0001c0006a0007c0012 | a0001c0002t0001a0001c0002t0016a0001c0002t0017others(2): Show | a0001c0002t0001g0001 a0001c0002t0001g0014 a0001c0002t0001g0015 others(38): Show |
125 | 430 | 0.2907 | -6 | c.-7- others(19): Show |
SGO1 | ENSG00000129810.15 | transcript | ENST00000412997.6 | protein_coding | 1/7 | chr3 | TogoVar | |||||||
SGPL1_chr10_70810948_70886184 | 70816248 | CGGGGCG | C | intron_variant | MODIFIER | HG00738.hp1 HG01070.hp1 HG01168.hp1 others(13): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0007others(1): Show | a0001c0001t0021a0001c0001t0034a0001c0006t0019others(4): Show | a0001c0001t0021g0019 a0001c0001t0021g0049 a0001c0001t0034g0046 others(11): Show |
16 | 402 | 0.0398 | -6 | c.-44 others(21): Show |
SGPL1 | ENSG00000166224.18 | transcript | ENST00000373202.8 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SGPP1_chr14_63679216_63733065 | 63688315 | CAAAAAA | C | intron_variant | MODIFIER | HG00280.hp2 HG00642.hp1 HG01884.hp2 others(4): Show |
a0001a0003 | a0001c0002a0003c0006 | a0001c0002t0002a0003c0006t0002 | a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0026 others(4): Show |
7 | 288 | 0.0243 | -6 | c.775 others(23): Show |
SGPP1 | ENSG00000126821.8 | transcript | ENST00000247225.7 | protein_coding | 2/2 | chr14 | TogoVar | |||||||
SGPP1_chr14_63679216_63733065 | 63718977 | CATATAT | C | intron_variant | MODIFIER | HG00642.hp2 HG01109.hp2 HG01243.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006 | a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0066 others(12): Show |
15 | 288 | 0.0521 | -6 | c.684 others(23): Show |
SGPP1 | ENSG00000126821.8 | transcript | ENST00000247225.7 | protein_coding | 1/2 | chr14 | TogoVar | |||||||
SGPP1_chr14_63679216_63733065 | 63719726 | CCTCTCT | C | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp2 HG00642.hp1 others(33): Show |
a0001a0002a0003 | a0001c0002a0002c0005a0003c0006 | a0001c0002t0002a0001c0002t0003a0001c0002t0005others(9): Show | a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0026 others(32): Show |
36 | 288 | 0.1250 | -6 | c.684 others(23): Show |
SGPP1 | ENSG00000126821.8 | transcript | ENST00000247225.7 | protein_coding | 1/2 | chr14 | TogoVar | |||||||
SGPP1_chr14_63679216_63733065 | 63719733 | CTCTCTA | C | intron_variant | MODIFIER | HG01175.hp1 HG02258.hp2 HG02559.hp1 others(11): Show |
a0001a0004 | a0001c0002a0001c0003a0004c0007 | a0001c0002t0004a0001c0003t0002a0004c0007t0002 | a0001c0002t0004g0002 a0001c0002t0004g0051 a0001c0002t0004g0052 others(10): Show |
14 | 288 | 0.0486 | -6 | c.684 others(23): Show |
SGPP1 | ENSG00000126821.8 | transcript | ENST00000247225.7 | protein_coding | 1/2 | chr14 | TogoVar | |||||||
SGPP2_chr2_222419543_222567621 | 222434975 | TACACAC | T | intron_variant | MODIFIER | HG00735.hp1 HG01175.hp1 HG02027.hp1 others(1): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0014a0001c0001t0015a0001c0001t0039others(1): Show | a0001c0001t0014g0139 a0001c0001t0015g0018 a0001c0001t0039g0019 others(1): Show |
4 | 272 | 0.0147 | -6 | c.219 others(25): Show |
SGPP2 | ENSG00000163082.10 | transcript | ENST00000321276.8 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SGPP2_chr2_222419543_222567621 | 222478267 | TTGTGTG | T | intron_variant | MODIFIER | HG00735.hp1 HG00741.hp1 HG01516.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0013a0001c0001t0039others(1): Show | a0001c0001t0001g0007 a0001c0001t0013g0141 a0001c0001t0039g0019 others(1): Show |
4 | 272 | 0.0147 | -6 | c.378 others(23): Show |
SGPP2 | ENSG00000163082.10 | transcript | ENST00000321276.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SGPP2_chr2_222419543_222567621 | 222495031 | CAAACAA | C | intron_variant | MODIFIER | HG02109.hp2 HG02145.hp2 HG02451.hp1 others(4): Show |
a0001 | a0001c0002a0001c0005a0001c0010 | a0001c0002t0034a0001c0005t0036a0001c0005t0074others(3): Show | a0001c0002t0034g0062 a0001c0002t0034g0236 a0001c0005t0036g0244 others(4): Show |
7 | 272 | 0.0257 | -6 | c.378 others(25): Show |
SGPP2 | ENSG00000163082.10 | transcript | ENST00000321276.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SGPP2_chr2_222419543_222567621 | 222565885 | GTATATA | G | downstream_gene_variant | MODIFIER | HG01496.hp2 HG02004.hp2 HG02015.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0016others(4): Show | a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0052 others(15): Show |
18 | 272 | 0.0662 | -6 | c.*69 others(17): Show |
SGPP2 | ENSG00000163082.10 | transcript | ENST00000321276.8 | protein_coding | 3265 | chr2 | TogoVar |