view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PTP4A2_chr1_31901421_31943368 | 31908132 | ATATTATA others(1): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00408.hp1 HG01884.hp1 NA18995.hp2 |
a0001 | a0001c0001 | a0001c0001t0114a0001c0001t0126a0001c0001t0127 | a0001c0001t0114g0174 a0001c0001t0126g0281 a0001c0001t0127g0253 |
3 | 354 | 0.0085 | -8 | c.*71 others(17): Show |
PTP4A2 | ENSG00000184007.22 | transcript | ENST00000647444.2 | protein_coding | 6/6 | 712 | chr1 | TogoVar | ||||||
PTP4A2_chr1_31901421_31943368 | 31922586 | GTTTCTTT others(1): Show |
G | intron_variant | MODIFIER | HG00438.hp2 HG00621.hp1 HG00735.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0009others(13): Show | a0001c0001t0002g0161 a0001c0001t0002g0300 a0001c0001t0002g0301 others(15): Show |
18 | 354 | 0.0509 | -8 | c.-59 others(27): Show |
PTP4A2 | ENSG00000184007.22 | transcript | ENST00000647444.2 | protein_coding | 1/5 | chr1 | TogoVar | |||||||
PTPN11_chr12_112413947_112514918 | 112424956 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG02257.hp2 HG02922.hp1 NA18946.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0017 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 others(8): Show |
11 | 300 | 0.0367 | -8 | c.14+ others(23): Show |
PTPN11 | ENSG00000179295.19 | transcript | ENST00000351677.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
PTPN11_chr12_112413947_112514918 | 112442830 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG01099.hp2 HG01109.hp1 HG02055.hp2 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0012 a0001c0001t0001g0028 a0001c0001t0001g0030 others(15): Show |
18 | 300 | 0.0600 | -8 | c.15- others(23): Show |
PTPN11 | ENSG00000179295.19 | transcript | ENST00000351677.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
PTPN12_chr7_77532295_77645069 | 77571695 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp1 HG00438.hp2 others(77): Show |
a0001a0002a0004 | a0001c0001a0001c0007a0002c0002others(1): Show | a0001c0001t0001a0001c0007t0001a0002c0002t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 others(77): Show |
80 | 310 | 0.2581 | -8 | c.208 others(23): Show |
PTPN12 | ENSG00000127947.16 | transcript | ENST00000248594.11 | protein_coding | 2/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTPN13_chr4_86589315_86820161 | 86680347 | CTCTATCT others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG01074.hp2 HG01099.hp2 others(27): Show |
a0001a0002a0003others(6): Show | a0001c0003a0001c0004a0002c0001others(9): Show | a0001c0003t0001a0001c0004t0001a0001c0004t0002others(13): Show | a0001c0003t0001g0059 a0001c0003t0001g0061 a0001c0003t0001g0065 others(27): Show |
30 | 198 | 0.1515 | -8 | c.295 others(25): Show |
PTPN13 | ENSG00000163629.13 | transcript | ENST00000411767.7 | protein_coding | 3/47 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PTPN14_chr1_214343700_214556602 | 214364766 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG02055.hp1 HG02109.hp1 others(8): Show |
a0001 | a0001c0001a0001c0018 | a0001c0001t0008a0001c0001t0014a0001c0001t0032others(6): Show | a0001c0001t0008g0002 a0001c0001t0008g0065 a0001c0001t0008g0069 others(8): Show |
11 | 272 | 0.0404 | -8 | c.327 others(23): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 17/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214373558 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00741.hp1 HG01109.hp2 HG01257.hp2 others(20): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0008others(4): Show | a0001c0001t0011a0001c0001t0014a0001c0001t0043others(19): Show | a0001c0001t0011g0036 a0001c0001t0014g0031 a0001c0001t0043g0029 others(20): Show |
23 | 272 | 0.0846 | -8 | c.290 others(25): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 15/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214395588 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG01106.hp1 HG01257.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0011a0001c0001t0057a0001c0001t0058others(7): Show | a0001c0001t0011g0036 a0001c0001t0057g0028 a0001c0001t0058g0009 others(7): Show |
10 | 272 | 0.0368 | -8 | c.759 others(23): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 8/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214450133 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG02451.hp2 HG02572.hp1 HG02630.hp1 others(7): Show |
a0001a0002a0003 | a0001c0001a0001c0006a0001c0022others(2): Show | a0001c0001t0010a0001c0001t0058a0001c0001t0067others(7): Show | a0001c0001t0010g0079 a0001c0001t0058g0009 a0001c0001t0067g0017 others(7): Show |
10 | 272 | 0.0368 | -8 | c.344 others(25): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 3/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214491002 | AAAGAAAG others(1): Show |
A | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00438.hp2 others(82): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0008others(9): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(56): Show | a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 others(82): Show |
85 | 272 | 0.3125 | -8 | c.-15 others(29): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 1/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214495659 | TTTTTTTT others(1): Show |
T | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG01891.hp2 others(26): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0008others(7): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0010others(23): Show | a0001c0001t0002g0020 a0001c0001t0002g0030 a0001c0001t0008g0002 others(26): Show |
29 | 272 | 0.1066 | -8 | c.-15 others(29): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 1/18 | chr1 | TogoVar | |||||||
PTPN14_chr1_214343700_214556602 | 214556008 | AGTGTGTG others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00639.hp1 HG00639.hp2 others(24): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0010others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(21): Show | a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 others(24): Show |
27 | 272 | 0.0993 | -8 | c.-49 others(19): Show |
PTPN14 | ENSG00000152104.12 | transcript | ENST00000366956.10 | protein_coding | 4407 | chr1 | TogoVar | |||||||
PTPN18_chr2_130351056_130380405 | 130361512 | CTCTTTCT others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp2 HG00558.hp1 others(73): Show |
a0001a0002a0005others(2): Show | a0001c0001a0002c0002a0005c0007others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0009 others(37): Show |
76 | 380 | 0.2000 | -8 | c.414 others(25): Show |
PTPN18 | ENSG00000072135.13 | transcript | ENST00000175756.10 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN20_chr10_46906428_47007322 | 46953335 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01192.hp2 HG01255.hp1 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0064 others(10): Show |
13 | 312 | 0.0417 | -8 | c.340 others(25): Show |
PTPN20 | ENSG00000204179.11 | transcript | ENST00000374339.5 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PTPN21_chr14_88460778_88560007 | 88523716 | GACACACA others(1): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG01109.hp2 HG01167.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0008a0002c0002t0009 | a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0167 others(3): Show |
6 | 348 | 0.0172 | -8 | c.181 others(25): Show |
PTPN21 | ENSG00000070778.13 | transcript | ENST00000556564.6 | protein_coding | 2/18 | chr14 | TogoVar | |||||||
PTPN22_chr1_113808811_113876712 | 113850200 | AGAAGGAA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00423.hp2 others(97): Show |
a0001a0002a0004others(4): Show | a0001c0001a0002c0002a0004c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0030 others(91): Show |
100 | 358 | 0.2793 | -8 | c.829 others(25): Show |
PTPN22 | ENSG00000134242.16 | transcript | ENST00000359785.10 | protein_coding | 10/20 | chr1 | TogoVar | |||||||
PTPN23_chr3_47376021_47418435 | 47416615 | CTTTTTTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00642.hp2 HG00738.hp1 others(40): Show |
a0001a0002a0005 | a0001c0001a0002c0003a0005c0007others(1): Show | a0001c0001t0001a0002c0003t0001a0005c0007t0001others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(36): Show |
43 | 332 | 0.1295 | -8 | c.*34 others(19): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 3181 | chr3 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12815085 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00642.hp1 others(65): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(4): Show | a0001c0001t0001g0072 a0001c0001t0001g0186 a0001c0001t0001g0218 others(65): Show |
68 | 370 | 0.1838 | -8 | c.706 others(23): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 6/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12852191 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG02896.hp2 HG02897.hp1 HG03225.hp1 |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0103 a0001c0001t0010g0104 a0001c0001t0010g0105 |
3 | 370 | 0.0081 | -8 | c.160 others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 2/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12867318 | CAATAAAT others(1): Show |
C | intron_variant | MODIFIER | HG02109.hp2 HG02559.hp2 HG02630.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0194 a0001c0001t0002g0220 a0001c0001t0002g0221 others(1): Show |
4 | 370 | 0.0108 | -8 | c.70- others(23): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12870282 | TACATATA others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00642.hp1 others(45): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(3): Show | a0001c0001t0001g0048 a0001c0001t0002g0007 a0001c0001t0002g0008 others(45): Show |
48 | 370 | 0.1297 | -8 | c.70- others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12870342 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG01952.hp1 HG02258.hp1 others(7): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0005a0001c0001t0008a0003c0003t0005 | a0001c0001t0005g0094 a0001c0001t0008g0090 a0001c0001t0008g0091 others(7): Show |
10 | 370 | 0.0270 | -8 | c.70- others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12870433 | ATATATGT others(1): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG02622.hp2 HG02723.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0152 a0001c0001t0001g0157 a0001c0001t0001g0174 others(2): Show |
5 | 370 | 0.0135 | -8 | c.70- others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12870439 | GTGTATAT others(1): Show |
G | intron_variant | MODIFIER | HG02056.hp2 HG03654.hp2 NA18963.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004 | a0001c0001t0001g0122 a0001c0001t0003g0134 a0001c0001t0004g0112 others(3): Show |
6 | 370 | 0.0162 | -8 | c.70- others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12870462 | TAGAGAGA others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG01070.hp2 HG02055.hp2 others(39): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(5): Show | a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0065 others(39): Show |
42 | 370 | 0.1135 | -8 | c.70- others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN2_chr18_12787152_12889237 | 12872051 | AAAAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01069.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0015 | a0001c0001t0001g0265 a0001c0001t0005g0256 a0001c0001t0005g0257 others(13): Show |
16 | 370 | 0.0432 | -8 | c.69+ others(25): Show |
PTPN2 | ENSG00000175354.20 | transcript | ENST00000309660.10 | protein_coding | 1/8 | chr18 | TogoVar | |||||||
PTPN3_chr9_109370700_109503307 | 109377395 | TACACACA others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00323.hp2 HG00733.hp2 HG00735.hp2 others(16): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0004 | a0001c0001t0005a0001c0001t0040a0002c0002t0005others(1): Show | a0001c0001t0005g0057 a0001c0001t0005g0106 a0001c0001t0005g0108 others(16): Show |
19 | 290 | 0.0655 | -8 | c.*21 others(19): Show |
PTPN3 | ENSG00000070159.14 | transcript | ENST00000374541.4 | protein_coding | 26/26 | 2153 | chr9 | TogoVar | ||||||
PTPN3_chr9_109370700_109503307 | 109380214 | AATCTATC others(1): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG01099.hp2 HG01358.hp2 others(7): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0004c0009others(1): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0007others(6): Show | a0001c0001t0004g0187 a0001c0001t0005g0183 a0001c0001t0007g0135 others(7): Show |
10 | 290 | 0.0345 | -8 | c.266 others(25): Show |
PTPN3 | ENSG00000070159.14 | transcript | ENST00000374541.4 | protein_coding | 25/25 | chr9 | TogoVar | |||||||
PTPN4_chr2_119754922_119989899 | 119766476 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG00735.hp2 HG01975.hp1 HG02486.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007a0001c0001t0008others(4): Show | a0001c0001t0002g0184 a0001c0001t0002g0203 a0001c0001t0002g0204 others(11): Show |
14 | 252 | 0.0556 | -8 | c.-18 others(25): Show |
PTPN4 | ENSG00000088179.9 | transcript | ENST00000263708.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN4_chr2_119754922_119989899 | 119847275 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 HG01346.hp1 |
a0002 | a0002c0003 | a0002c0003t0015a0002c0003t0027 | a0002c0003t0015g0024 a0002c0003t0015g0025 a0002c0003t0027g0026 |
3 | 252 | 0.0119 | -8 | c.139 others(27): Show |
PTPN4 | ENSG00000088179.9 | transcript | ENST00000263708.7 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN4_chr2_119754922_119989899 | 119876897 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00735.hp2 HG02109.hp2 HG02572.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0008a0001c0001t0012a0001c0001t0031others(3): Show | a0001c0001t0008g0013 a0001c0001t0008g0014 a0001c0001t0012g0011 others(11): Show |
14 | 252 | 0.0556 | -8 | c.247 others(23): Show |
PTPN4 | ENSG00000088179.9 | transcript | ENST00000263708.7 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN4_chr2_119754922_119989899 | 119931415 | ATCTTTCT others(1): Show |
A | intron_variant | MODIFIER | HG02486.hp2 HG02559.hp2 HG02922.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0114 a0001c0001t0009g0115 a0001c0001t0009g0150 others(1): Show |
4 | 252 | 0.0159 | -8 | c.107 others(25): Show |
PTPN4 | ENSG00000088179.9 | transcript | ENST00000263708.7 | protein_coding | 13/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN4_chr2_119754922_119989899 | 119955944 | TAATAAAT others(1): Show |
T | intron_variant | MODIFIER | HG00735.hp2 HG02896.hp1 HG02897.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0012a0001c0001t0031 | a0001c0001t0008g0013 a0001c0001t0008g0014 a0001c0001t0012g0011 others(3): Show |
6 | 252 | 0.0238 | -8 | c.198 others(25): Show |
PTPN4 | ENSG00000088179.9 | transcript | ENST00000263708.7 | protein_coding | 20/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PTPN5_chr11_18722928_18796798 | 18777987 | AAAGAAAG others(1): Show |
A | intron_variant | MODIFIER | HG00609.hp1 HG00609.hp2 HG00735.hp2 others(29): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(3): Show | a0001c0001t0001g0008 a0001c0001t0001g0078 a0001c0001t0001g0081 others(27): Show |
32 | 388 | 0.0825 | -8 | c.-11 others(27): Show |
PTPN5 | ENSG00000110786.18 | transcript | ENST00000358540.7 | protein_coding | 1/14 | chr11 | TogoVar | |||||||
PTPN9_chr15_75458251_75584315 | 75520437 | AATAGATA others(1): Show |
A | intron_variant | MODIFIER | HG02615.hp2 HG04228.hp2 NA18998.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0040others(1): Show | a0001c0001t0002g0200 a0001c0001t0002g0289 a0001c0001t0005g0116 others(2): Show |
5 | 326 | 0.0153 | -8 | c.422 others(25): Show |
PTPN9 | ENSG00000169410.11 | transcript | ENST00000618819.5 | protein_coding | 4/12 | chr15 | TogoVar | |||||||
PTPN9_chr15_75458251_75584315 | 75520476 | AGATAGAT others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp1 HG00558.hp1 others(81): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(4): Show | a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0047 others(81): Show |
84 | 326 | 0.2577 | -8 | c.422 others(25): Show |
PTPN9 | ENSG00000169410.11 | transcript | ENST00000618819.5 | protein_coding | 4/12 | chr15 | TogoVar | |||||||
PTPN9_chr15_75458251_75584315 | 75524777 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG03834.hp1 NA18945.hp2 NA18948.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0102 a0001c0001t0005g0104 a0001c0001t0005g0107 others(3): Show |
6 | 326 | 0.0184 | -8 | c.208 others(23): Show |
PTPN9 | ENSG00000169410.11 | transcript | ENST00000618819.5 | protein_coding | 2/12 | chr15 | TogoVar | |||||||
PTPN9_chr15_75458251_75584315 | 75584256 | TGTGTGGG others(1): Show |
T | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00438.hp1 others(126): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(15): Show | a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 others(126): Show |
129 | 326 | 0.3957 | -8 | c.-54 others(19): Show |
PTPN9 | ENSG00000169410.11 | transcript | ENST00000618819.5 | protein_coding | 4942 | chr15 | TogoVar | |||||||
PTPRA_chr20_2868481_3043669 | 2881164 | GGGCGTGG others(1): Show |
G | intron_variant | MODIFIER | HG02280.hp1 HG02559.hp2 HG03130.hp2 others(3): Show |
a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0139 a0002c0005t0001g0140 a0002c0005t0001g0141 others(3): Show |
6 | 356 | 0.0169 | -8 | c.-12 others(27): Show |
PTPRA | ENSG00000132670.21 | transcript | ENST00000399903.7 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PTPRA_chr20_2868481_3043669 | 2945582 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(245): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0007others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(14): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 others(245): Show |
248 | 356 | 0.6966 | -8 | c.-49 others(25): Show |
PTPRA | ENSG00000132670.21 | transcript | ENST00000399903.7 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PTPRA_chr20_2868481_3043669 | 2956661 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(272): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0003a0001c0004others(12): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(17): Show | a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 others(272): Show |
275 | 356 | 0.7725 | -8 | c.-6- others(23): Show |
PTPRA | ENSG00000132670.21 | transcript | ENST00000399903.7 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PTPRA_chr20_2868481_3043669 | 2958658 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG01496.hp2 others(10): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0001a0002c0005t0001 | a0001c0001t0001g0025 a0001c0001t0001g0060 a0001c0001t0001g0071 others(10): Show |
13 | 356 | 0.0365 | -8 | c.-6- others(23): Show |
PTPRA | ENSG00000132670.21 | transcript | ENST00000399903.7 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PTPRA_chr20_2868481_3043669 | 2985884 | CTTGTTTG others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(74): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(5): Show | a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(74): Show |
77 | 356 | 0.2163 | -8 | c.443 others(23): Show |
PTPRA | ENSG00000132670.21 | transcript | ENST00000399903.7 | protein_coding | 6/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PTPRB_chr12_70510870_70642429 | 70548342 | TCTCTCAC others(1): Show |
T | intron_variant | MODIFIER | HG01081.hp2 HG01361.hp2 HG02523.hp1 others(1): Show |
a0001a0002a0003others(1): Show | a0001c0005a0002c0007a0003c0003others(1): Show | a0001c0005t0025a0002c0007t0002a0003c0003t0001others(1): Show | a0001c0005t0025g0078 a0002c0007t0002g0086 a0003c0003t0001g0093 others(1): Show |
4 | 300 | 0.0133 | -8 | c.538 others(27): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 21/33 | chr12 | TogoVar | |||||||
PTPRB_chr12_70510870_70642429 | 70548344 | TCTCACAC others(1): Show |
T | intron_variant | MODIFIER | HG02055.hp1 HG02965.hp1 NA19030.hp2 |
a0002a0003a0019 | a0002c0072a0003c0016a0019c0094 | a0002c0072t0008a0003c0016t0008a0019c0094t0008 | a0002c0072t0008g0258 a0003c0016t0008g0238 a0019c0094t0008g0087 |
3 | 300 | 0.0100 | -8 | c.538 others(27): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 21/33 | chr12 | TogoVar | |||||||
PTPRB_chr12_70510870_70642429 | 70548346 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02258.hp2 HG02886.hp1 others(13): Show |
a0002a0003a0004others(4): Show | a0002c0010a0002c0019a0002c0038others(8): Show | a0002c0010t0006a0002c0019t0006a0002c0019t0018others(9): Show | a0002c0010t0006g0114 a0002c0010t0006g0115 a0002c0019t0006g0005 others(13): Show |
16 | 300 | 0.0533 | -8 | c.538 others(27): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 21/33 | chr12 | TogoVar | |||||||
PTPRB_chr12_70510870_70642429 | 70599905 | GGCTATAG others(1): Show |
G | intron_variant | MODIFIER | HG01361.hp1 HG02055.hp2 HG02486.hp1 others(2): Show |
a0009 | a0009c0030a0009c0044 | a0009c0030t0011a0009c0030t0029a0009c0030t0045others(1): Show | a0009c0030t0011g0117 a0009c0030t0029g0119 a0009c0030t0045g0264 others(2): Show |
5 | 300 | 0.0167 | -8 | c.980 others(25): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 4/33 | chr12 | TogoVar | |||||||
PTPRB_chr12_70510870_70642429 | 70626292 | CATCCATC others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG01978.hp1 others(20): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0005a0001c0104others(18): Show | a0001c0001t0023a0001c0005t0005a0001c0104t0001others(19): Show | a0001c0001t0023g0248 a0001c0005t0005g0121 a0001c0104t0001g0251 others(20): Show |
23 | 300 | 0.0767 | -8 | c.452 others(25): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 2/33 | chr12 | TogoVar | |||||||
PTPRB_chr12_70510870_70642429 | 70626296 | CATCTATC others(1): Show |
C | intron_variant | MODIFIER | HG01261.hp1 HG01346.hp1 HG01517.hp1 others(13): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0005others(8): Show | a0001c0001t0003a0001c0001t0011a0001c0001t0033others(11): Show | a0001c0001t0003g0095 a0001c0001t0003g0111 a0001c0001t0011g0105 others(13): Show |
16 | 300 | 0.0533 | -8 | c.452 others(25): Show |
PTPRB | ENSG00000127329.16 | transcript | ENST00000334414.11 | protein_coding | 2/33 | chr12 | TogoVar |