Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTPN13_chr4_86589315_86820161	86728643	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0014 a0003c0002t0002g0014	1	198	0.0051	18	c.160 others(37): Show c.1609-3740_1609-3723dupTTTTTTTTTTTTTTTTTT	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	10/47		INFO_REALIGN_3_PRIME	chr4	TogoVar
PTPN13_chr4_86589315_86820161	86761139	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02486.hp2 HG02717.hp1 others(1): Show HG02273.hp2 HG02486.hp2 HG02717.hp1 NA19011.hp1	a0002 a0003 a0008 a0002 a0003 a0008	a0002c0001 a0003c0002 a0008c0014 a0002c0001 a0003c0002 a0008c0014	a0002c0001t0002 a0003c0002t0002 a0008c0014t0003 a0002c0001t0002 a0003c0002t0002 a0008c0014t0003	a0002c0001t0002g0115 a0002c0001t0002g0148 a0003c0002t0002g0015 others(1): Show a0002c0001t0002g0115 a0002c0001t0002g0148 a0003c0002t0002g0015 a0008c0014t0003g0026	4	198	0.0202	18	c.355 others(37): Show c.3554-1574_3554-1557dupTATATATATATATATATA	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	23/47		INFO_REALIGN_3_PRIME	chr4	TogoVar
PTPN14_chr1_214343700_214556602	214355959	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0066 a0003c0005t0066	a0003c0005t0066g0083 a0003c0005t0066g0083	1	272	0.0037	18	c.19 others(29): Show c.1945_*1962dupAAAAAAAAAAAAAAAAAA	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	19/19	1962		chr1	TogoVar
PTPN14_chr1_214343700_214556602	214364766	A A	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0125 a0001c0001t0125	a0001c0001t0125g0226 a0001c0001t0125g0226	1	272	0.0037	18	c.327 others(34): Show c.3272-109_3272-92dupACACACACACACACACAC	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	17/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214395588	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA19064.hp2 NA19079.hp1 NA18949.hp2 NA19064.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0016 a0001c0002t0001 a0001c0001t0016 a0001c0002t0001	a0001c0001t0016g0114 a0001c0002t0001g0164 a0001c0002t0001g0177 a0001c0001t0016g0114 a0001c0002t0001g0164 a0001c0002t0001g0177	3	272	0.0110	18	c.759 others(33): Show c.759-620_759-603dupGTGTGTGTGTGTGTGTGT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	8/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214402437	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01256.hp2 HG02723.hp1 others(3): Show HG01071.hp1 HG01256.hp2 HG02723.hp1 HG03098.hp2 HG03130.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0026 a0001c0001 a0001c0026	a0001c0001t0024 a0001c0001t0026 a0001c0001t0067 others(3): Show a0001c0001t0024 a0001c0001t0026 a0001c0001t0067 a0001c0001t0088 a0001c0001t0160 a0001c0026t0053	a0001c0001t0024g0233 a0001c0001t0026g0192 a0001c0001t0067g0017 others(3): Show a0001c0001t0024g0233 a0001c0001t0026g0192 a0001c0001t0067g0017 a0001c0001t0088g0066 a0001c0001t0160g0242 a0001c0026t0053g0046	6	272	0.0221	18	c.581 others(33): Show c.581+428_581+445dupTTTTTTTTTTTTTTTTTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	6/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214465951	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01168.hp1 HG01256.hp2 others(21): Show HG00639.hp1 HG01168.hp1 HG01256.hp2 HG02145.hp1 HG02280.hp2 HG02970.hp2 HG03041.hp1 HG03130.hp2 HG03225.hp2 HG03491.hp1 HG03491.hp2 HG03579.hp1 HG03834.hp1 NA18946.hp2 NA18963.hp1 NA18989.hp2 NA18995.hp1 NA19002.hp1 NA19004.hp2 NA19043.hp2 NA19054.hp1 NA19065.hp1 NA20129.hp2 NA20905.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0006 others(5): Show a0001c0001 a0001c0002 a0001c0006 a0001c0018 a0001c0026 a0002c0003 a0003c0005 a0007c0012	a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 others(21): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 a0001c0001t0024 a0001c0001t0028 a0001c0001t0039 a0001c0001t0050 a0001c0001t0056 a0001c0001t0059 a0001c0001t0060 a0001c0001t0062 a0001c0001t0076 a0001c0001t0090 a0001c0001t0128 a0001c0001t0162 a0001c0001t0178 a0001c0002t0006 a0001c0002t0013 a0001c0006t0001 a0001c0018t0014 a0001c0026t0053 a0002c0003t0087 a0003c0005t0066 a0007c0012t0026	a0001c0001t0002g0132 a0001c0001t0008g0002 a0001c0001t0009g0047 others(21): Show a0001c0001t0002g0132 a0001c0001t0008g0002 a0001c0001t0009g0047 a0001c0001t0024g0233 a0001c0001t0028g0246 a0001c0001t0039g0005 a0001c0001t0050g0135 a0001c0001t0056g0142 a0001c0001t0059g0048 a0001c0001t0060g0163 a0001c0001t0062g0106 a0001c0001t0076g0013 a0001c0001t0090g0027 a0001c0001t0128g0216 a0001c0001t0162g0253 a0001c0001t0178g0268 a0001c0002t0006g0176 a0001c0002t0013g0213 a0001c0006t0001g0170 a0001c0018t0014g0025 a0001c0026t0053g0046 a0002c0003t0087g0077 a0003c0005t0066g0083 a0007c0012t0026g0237	24	272	0.0882	18	c.-15 others(36): Show c.-154-1012_-154-995dupAAAAAAAAAAAAAAAAAA	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520061	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0150 a0001c0001t0150	a0001c0001t0150g0195 a0001c0001t0150g0195	1	272	0.0037	18	c.-15 others(39): Show c.-155+31121_-155+31122insATATATATATATATATAT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520063	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp1 NA19064.hp1 HG01109.hp1 NA19064.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0007 a0002c0003t0147 a0001c0002t0007 a0002c0003t0147	a0001c0002t0007g0067 a0002c0003t0147g0197 a0001c0002t0007g0067 a0002c0003t0147g0197	2	272	0.0074	18	c.-15 others(39): Show c.-155+31119_-155+31120insATATATATATATATATAT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520065	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02129.hp1 HG02622.hp2 others(4): Show HG00738.hp2 HG02129.hp1 HG02622.hp2 NA18969.hp2 NA19010.hp1 NA20905.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0015 a0001c0001 a0001c0002 a0001c0015	a0001c0001t0002 a0001c0001t0010 a0001c0001t0037 others(4): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0037 a0001c0002t0001 a0001c0002t0020 a0001c0002t0115 a0001c0015t0001	a0001c0001t0002g0059 a0001c0001t0010g0064 a0001c0001t0037g0054 others(4): Show a0001c0001t0002g0059 a0001c0001t0010g0064 a0001c0001t0037g0054 a0001c0002t0001g0045 a0001c0002t0020g0057 a0001c0002t0115g0049 a0001c0015t0001g0053	7	272	0.0257	18	c.-15 others(39): Show c.-155+31117_-155+31118insATATATATATATATTTTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520065	A A	AAAATATA others(11): Show AAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02135.hp2 HG03130.hp1 others(6): Show HG01256.hp2 HG02135.hp2 HG03130.hp1 HG04199.hp2 NA18970.hp2 NA19065.hp2 NA19081.hp1 NA19081.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0026 a0001c0001 a0001c0002 a0001c0026	a0001c0001t0004 a0001c0001t0008 a0001c0001t0030 others(6): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0030 a0001c0001t0041 a0001c0001t0042 a0001c0001t0096 a0001c0002t0007 a0001c0002t0079 a0001c0026t0053	a0001c0001t0004g0039 a0001c0001t0008g0065 a0001c0001t0030g0001 others(6): Show a0001c0001t0004g0039 a0001c0001t0008g0065 a0001c0001t0030g0001 a0001c0001t0041g0042 a0001c0001t0042g0033 a0001c0001t0096g0050 a0001c0002t0007g0060 a0001c0002t0079g0063 a0001c0026t0053g0046	9	272	0.0331	18	c.-15 others(39): Show c.-155+31117_-155+31118insATATATATATATATATTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520065	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0043 a0001c0001t0002g0043	1	272	0.0037	18	c.-15 others(39): Show c.-155+31100_-155+31117dupATATATATATATATATAT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214531498	T T	TCACACAC others(11): Show TCACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02622.hp1 HG02615.hp1 HG02622.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0141 a0002c0003t0086 a0001c0001t0141 a0002c0003t0086	a0001c0001t0141g0232 a0002c0003t0086g0026 a0001c0001t0141g0232 a0002c0003t0086g0026	2	272	0.0074	18	c.-15 others(39): Show c.-155+19684_-155+19685insTGTGTGTGTGTGTGTGTG	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214531499	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG03017.hp2 HG04184.hp1 others(7): Show HG02738.hp2 HG03017.hp2 HG04184.hp1 NA18982.hp2 NA18995.hp1 NA19005.hp1 NA19010.hp1 NA19065.hp2 NA19081.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0030 a0001c0001t0041 a0001c0001t0042 a0001c0001t0060 a0001c0001t0069 a0001c0002t0020	a0001c0001t0002g0043 a0001c0001t0003g0056 a0001c0001t0004g0041 others(7): Show a0001c0001t0002g0043 a0001c0001t0003g0056 a0001c0001t0004g0041 a0001c0001t0009g0058 a0001c0001t0030g0001 a0001c0001t0041g0042 a0001c0001t0042g0033 a0001c0001t0060g0163 a0001c0001t0069g0162 a0001c0002t0020g0057	10	272	0.0368	18	c.-15 others(39): Show c.-155+19666_-155+19683dupGTGTGTGTGTGTGTGTGT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN1_chr20_50505383_50590241	50524569	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01074.hp1 HG01258.hp2 others(7): Show HG00558.hp2 HG01074.hp1 HG01258.hp2 HG03017.hp2 HG03041.hp2 HG03453.hp1 HG03942.hp1 NA18981.hp1 NA19065.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0011 a0001c0001t0001 a0001c0002t0001 a0001c0002t0011	a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0272 others(7): Show a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0272 a0001c0002t0001g0211 a0001c0002t0001g0273 a0001c0002t0001g0274 a0001c0002t0001g0275 a0001c0002t0001g0284 a0001c0002t0001g0315 a0001c0002t0011g0309	10	336	0.0298	18	c.63+ others(35): Show c.63+13987_63+14004dupTTTTTTTTTTTTTTTTTT	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN1_chr20_50505383_50590241	50554380	A A	ATCTCTCT others(11): Show ATCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00609.hp2 NA18998.hp1 HG00609.hp2 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0195 a0001c0001t0001g0075 a0001c0001t0001g0195	2	336	0.0060	18	c.64- others(33): Show c.64-6972_64-6955dupTCTCTCTCTCTCTCTCTC	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN21_chr14_88460778_88560007	88518386	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02602.hp1 NA19057.hp2 HG02602.hp1 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0193 a0001c0001t0001g0196	2	348	0.0058	18	c.181 others(35): Show c.181-1143_181-1126dupTATATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518386	G G	GTGTATAT others(11): Show GTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01516.hp2 HG01884.hp2 others(4): Show HG01069.hp2 HG01516.hp2 HG01884.hp2 HG02132.hp2 HG02647.hp1 NA18939.hp1 NA18954.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0005 a0001c0001t0030 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0030 a0002c0002t0016	a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0182 others(4): Show a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0182 a0001c0001t0001g0221 a0001c0001t0005g0121 a0001c0001t0030g0104 a0002c0002t0016g0266	7	348	0.0201	18	c.181 others(35): Show c.181-1126_181-1125insTATATATATATATATACA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518386	G G	GTGTGTAT others(11): Show GTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01361.hp2 HG01099.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0141 a0001c0001t0001g0192 a0001c0001t0001g0141 a0001c0001t0001g0192	2	348	0.0058	18	c.181 others(35): Show c.181-1126_181-1125insTATATATATATATACACA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	A A	ATATATAT others(11): Show ATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	348	0.0029	18	c.181 others(35): Show c.181-1154_181-1153insAATATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	A A	ATATATAT others(11): Show ATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0175 a0001c0001t0001g0175	1	348	0.0029	18	c.181 others(35): Show c.181-1154_181-1153insAAAATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	A A	ATATATAT others(11): Show ATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18974.hp1 NA18953.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0220 a0001c0001t0001g0154 a0001c0001t0001g0220	2	348	0.0058	18	c.181 others(35): Show c.181-1154_181-1153insAAAAAATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88558466	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0007 a0004c0005t0007	a0004c0005t0007g0068 a0004c0005t0007g0068	1	348	0.0029	18	c.-40 others(29): Show c.-4019_-4018insTTTTTTTTTTTTTTTTTT	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding		3460		chr14	TogoVar
PTPN2_chr18_12787152_12889237	12807586	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	370	0.0027	18	c.859 others(35): Show c.859-5436_859-5435insATATATTTTTTTTTTTTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	7/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12835382	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG06807.hp2 HG02922.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0061 a0001c0001t0013g0062 a0001c0001t0013g0061 a0001c0001t0013g0062	2	370	0.0054	18	c.261 others(35): Show c.261+1408_261+1409insAAAAAAAAAAAAAAAAAA	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	3/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12852191	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01515.hp1 NA18965.hp1 others(4): Show HG00673.hp1 HG01515.hp1 NA18965.hp1 NA18972.hp2 NA18997.hp1 NA19010.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 others(1): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0016	a0001c0001t0003g0245 a0001c0001t0003g0252 a0001c0001t0005g0261 others(4): Show a0001c0001t0003g0245 a0001c0001t0003g0252 a0001c0001t0005g0261 a0001c0001t0005g0266 a0001c0001t0006g0287 a0001c0001t0006g0288 a0001c0001t0016g0241	7	370	0.0189	18	c.160 others(35): Show c.160+6955_160+6972dupGTGTGTGTGTGTGTGTGT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	2/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12876296	A A	AAAGAAGA others(11): Show AAAGAAGAAGAAGAAGAAG	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01167.hp2 HG01361.hp2 others(16): Show HG00597.hp2 HG01167.hp2 HG01361.hp2 HG01952.hp1 HG01952.hp2 HG02145.hp1 HG02258.hp1 HG02647.hp1 HG02717.hp2 HG03041.hp2 HG03130.hp1 HG03209.hp1 HG03453.hp1 HG03453.hp2 NA18944.hp1 NA18951.hp1 NA18968.hp2 NA18999.hp1 NA19030.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0026 a0003c0003t0005	a0001c0001t0001g0198 a0001c0001t0001g0223 a0001c0001t0001g0230 others(16): Show a0001c0001t0001g0198 a0001c0001t0001g0223 a0001c0001t0001g0230 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0224 a0001c0001t0004g0282 a0001c0001t0005g0094 a0001c0001t0008g0090 a0001c0001t0008g0091 a0001c0001t0008g0092 a0001c0001t0008g0095 a0001c0001t0010g0238 a0001c0001t0026g0087 a0003c0003t0005g0088 a0003c0003t0005g0089 a0003c0003t0005g0093 a0003c0003t0005g0097	19	370	0.0514	18	c.69+ others(33): Show c.69+7759_69+7776dupCTTCTTCTTCTTCTTCTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN4_chr2_119754922_119989899	119845253	G G	GGAGGGAG others(11): Show GGAGGGAGAGGGAGAGGGA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00738.hp2 HG01167.hp2 others(19): Show HG00609.hp2 HG00738.hp2 HG01167.hp2 HG01169.hp1 HG01255.hp2 HG01358.hp2 HG01928.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG02027.hp1 HG02148.hp1 HG02523.hp2 HG03239.hp2 NA18612.hp2 NA18967.hp2 NA18990.hp1 NA19009.hp2 NA19063.hp2 NA19074.hp1 NA19088.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0018 a0001c0001t0019 a0001c0001t0028 a0001c0001t0029 a0001c0001t0042	a0001c0001t0001g0097 a0001c0001t0002g0154 a0001c0001t0002g0171 others(19): Show a0001c0001t0001g0097 a0001c0001t0002g0154 a0001c0001t0002g0171 a0001c0001t0002g0175 a0001c0001t0002g0180 a0001c0001t0002g0185 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0212 a0001c0001t0002g0222 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0007g0191 a0001c0001t0007g0192 a0001c0001t0007g0194 a0001c0001t0007g0229 a0001c0001t0018g0240 a0001c0001t0019g0207 a0001c0001t0028g0182 a0001c0001t0029g0179 a0001c0001t0042g0210	22	252	0.0873	18	c.139 others(37): Show c.139-17278_139-17277insAGAGGGAGAGGGAGAGGG	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119845259	G G	GGAGGGAG others(11): Show GGAGGGAGAGGGAGAGGGA	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0006 a0001c0001t0032g0006	1	252	0.0040	18	c.139 others(37): Show c.139-17272_139-17271insAGAGGGAGAGGGAGAGGG	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119845265	G G	GGAGGGAG others(11): Show GGAGGGAGAGGGAGAGGGA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0160 a0001c0001t0002g0160	1	252	0.0040	18	c.139 others(37): Show c.139-17253_139-17236dupAGAGGGAGAGGGAGAGGG	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119914248	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0236 a0001c0001t0006g0236	1	252	0.0040	18	c.765 others(33): Show c.765-920_765-903dupTTTTTTTTTTTTTTTTTT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	10/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119973655	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0164 a0001c0001t0002g0164	1	252	0.0040	18	c.269 others(37): Show c.2695-3319_2695-3302dupTTTTTTTTTTTTTTTTTT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN5_chr11_18722928_18796798	18746192	T T	TATATATA others(11): Show TATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0344 a0002c0002t0001g0344	1	388	0.0026	18	c.98- others(33): Show c.98-1994_98-1993insGTATATATATATATATAT	PTPN5	ENSG00000110786.18	transcript	ENST00000358540.7	protein_coding	3/14			chr11	TogoVar
PTPN9_chr15_75458251_75584315	75537753	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02976.hp2 HG02258.hp1 HG02976.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0011 a0004c0006t0011 a0001c0001t0011 a0004c0006t0011	a0001c0001t0011g0279 a0004c0006t0011g0280 a0001c0001t0011g0279 a0004c0006t0011g0280	2	326	0.0061	18	c.64- others(35): Show c.64-10510_64-10493dupTTTTTTTTTTTTTTTTTT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPRD_chr9_8309246_10618002	8321487	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0026 a0001c0006t0026	a0001c0006t0026g0034 a0001c0006t0026g0034	1	34	0.0294	18	c.553 others(37): Show c.5535-1539_5535-1522dupTATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	44/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8321507	A A	ATATATAT others(11): Show ATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	34	0.0294	18	c.553 others(37): Show c.5535-1542_5535-1541insCATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	44/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8338847	C C	CAGAGAGA others(11): Show CAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02683.hp1 HG01099.hp1 HG02683.hp1	a0001 a0001	a0001c0002 a0001c0012 a0001c0002 a0001c0012	a0001c0002t0011 a0001c0012t0016 a0001c0002t0011 a0001c0012t0016	a0001c0002t0011g0030 a0001c0012t0016g0028 a0001c0002t0011g0030 a0001c0012t0016g0028	2	34	0.0588	18	c.537 others(33): Show c.5379+57_5379+74dupCTCTCTCTCTCTCTCTCT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	43/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8557455	T T	TATATATA others(11): Show TATATATACATACACATAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 NA21309.hp2 HG00642.hp2 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0015 a0001c0001 a0005c0015	a0001c0001t0001 a0005c0015t0010 a0001c0001t0001 a0005c0015t0010	a0001c0001t0001g0004 a0005c0015t0010g0026 a0001c0001t0001g0004 a0005c0015t0010g0026	2	34	0.0588	18	c.353 others(37): Show c.353-28677_353-28676insGTATGTGTATGTATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	14/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8557455	T T	TATATATA others(11): Show TATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	34	0.0294	18	c.353 others(37): Show c.353-28677_353-28676insGTATATATATATATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	14/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8891137	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0005 a0001c0011t0005	a0001c0011t0005g0021 a0001c0011t0005g0021	1	34	0.0294	18	c.-10 others(41): Show c.-104+127559_-104+127560insAAAAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	11/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8951138	A A	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0026 a0001c0006t0026	a0001c0006t0026g0034 a0001c0006t0026g0034	1	34	0.0294	18	c.-10 others(39): Show c.-104+67541_-104+67558dupACACACACACACACACAC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	11/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9208020	C C	CATTTTTT others(11): Show CATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0022 a0001c0001t0013g0022	1	34	0.0294	18	c.-20 others(39): Show c.-202-24658_-202-24657insAAAAAAAAAAAAAAAAAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9208020	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG03225.hp2 HG03834.hp2 HG00642.hp1 HG03225.hp2 HG03834.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0001c0013 a0002c0009 a0001c0003 a0001c0013 a0002c0009	a0001c0003t0004 a0001c0013t0012 a0002c0009t0006 a0001c0003t0004 a0001c0013t0012 a0002c0009t0006	a0001c0003t0004g0027 a0001c0013t0012g0014 a0002c0009t0006g0007 a0001c0003t0004g0027 a0001c0013t0012g0014 a0002c0009t0006g0007	3	34	0.0882	18	c.-20 others(39): Show c.-202-24658_-202-24657insAAAAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9275127	A A	AATATATA others(11): Show AATATATATATAATATATT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0017 a0001c0010t0017	a0001c0010t0017g0016 a0001c0010t0017g0016	1	34	0.0294	18	c.-20 others(39): Show c.-202-91765_-202-91764insAATATATTATATATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9328618	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0001 a0001c0004t0003g0001	1	34	0.0294	18	c.-20 others(39): Show c.-203+68813_-203+68830dupAAAAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9467588	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0008 a0001c0001t0014g0008	1	34	0.0294	18	c.-23 others(39): Show c.-236-70124_-236-70107dupTTTTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	8/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9584356	C C	CATTATTA others(11): Show CATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0005 a0005	a0005c0015 a0005c0015	a0005c0015t0010 a0005c0015t0010	a0005c0015t0010g0026 a0005c0015t0010g0026	1	34	0.0294	18	c.-28 others(37): Show c.-286-9576_-286-9575insAATAATAATAATAATAAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	7/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9584359	C C	CATTATTA others(11): Show CATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03579.hp1 NA19240.hp1 HG01981.hp2 HG03579.hp1 NA19240.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0016 a0001c0001 a0004c0016	a0001c0001t0019 a0001c0001t0022 a0004c0016t0020 a0001c0001t0019 a0001c0001t0022 a0004c0016t0020	a0001c0001t0019g0023 a0001c0001t0022g0012 a0004c0016t0020g0011 a0001c0001t0019g0023 a0001c0001t0022g0012 a0004c0016t0020g0011	3	34	0.0882	18	c.-28 others(37): Show c.-286-9596_-286-9579dupAATAATAATAATAATAAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	7/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9629238	G G	GTGTGTAT others(11): Show GTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0012 a0001c0001t0022g0012	1	34	0.0294	18	c.-28 others(39): Show c.-286-54458_-286-54457insTATATATATATATACACA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	7/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9900641	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTGTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02055.hp2 HG02559.hp1 others(3): Show HG01109.hp2 HG02055.hp2 HG02559.hp1 HG03579.hp2 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0011 a0001c0001 a0001c0002 a0001c0011	a0001c0001t0014 a0001c0001t0024 a0001c0002t0003 others(3): Show a0001c0001t0014 a0001c0001t0024 a0001c0002t0003 a0001c0002t0009 a0001c0002t0015 a0001c0011t0005	a0001c0001t0014g0008 a0001c0001t0024g0032 a0001c0002t0003g0024 others(3): Show a0001c0001t0014g0008 a0001c0001t0024g0032 a0001c0002t0003g0024 a0001c0002t0009g0017 a0001c0002t0015g0010 a0001c0011t0005g0021	6	34	0.1765	18	c.-36 others(39): Show c.-368+37865_-368+37866insAAAAAACAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	5/45			chr9	TogoVar

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