JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
ABHD14A_chr3_51970064_51986196	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ABHD14A	chr3	51970064	51986196
ABHD14B_chr3_51963515_51979049	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD14B	chr3	51963515	51979049
ABHD14B_chr3_51963515_51979049	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD14B	chr3	51963515	51979049
ABHD15_chr17_29555547_29572037	HG00609	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	CHS	EAS	ABHD15	chr17	29555547	29572037
ABHD15_chr17_29555547_29572037	HG00609	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0023	CHS	EAS	ABHD15	chr17	29555547	29572037
ABHD16A_chr6_31681955_31708324	HG00609	hp1	a0005	a0005c0007	a0005c0007t0001	a0005c0007t0001g0129	CHS	EAS	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD16A	chr6	31681955	31708324
ABHD16B_chr20_63856498_63867988	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ABHD16B	chr20	63856498	63867988
ABHD16B_chr20_63856498_63867988	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	CHS	EAS	ABHD16B	chr20	63856498	63867988
ABHD17C_chr15_80690310_80760621	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0151	CHS	EAS	ABHD17C	chr15	80690310	80760621
ABHD17C_chr15_80690310_80760621	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	CHS	EAS	ABHD17C	chr15	80690310	80760621
ABHD18_chr4_127960406_128044953	HG00609	hp1	a0002	a0002c0002	a0002c0002t0053	a0002c0002t0053g0330	CHS	EAS	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	HG00609	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0236	CHS	EAS	ABHD18	chr4	127960406	128044953
ABHD1_chr2_27118815_27135812	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	CHS	EAS	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD1	chr2	27118815	27135812
ABHD4_chr14_22593300_22617963	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CHS	EAS	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	CHS	EAS	ABHD4	chr14	22593300	22617963
ABHD6_chr3_58232792_58299734	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0015	CHS	EAS	ABHD6	chr3	58232792	58299734
ABHD6_chr3_58232792_58299734	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0121	CHS	EAS	ABHD6	chr3	58232792	58299734
ABHD8_chr19_17287131_17308425	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABHD8	chr19	17287131	17308425
ABHD8_chr19_17287131_17308425	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0250	CHS	EAS	ABHD8	chr19	17287131	17308425
ABI2_chr2_203323394_203437169	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0232	CHS	EAS	ABI2	chr2	203323394	203437169
ABI2_chr2_203323394_203437169	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0023	CHS	EAS	ABI2	chr2	203323394	203437169
ABI3_chr17_49205707_49228225	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHS	EAS	ABI3	chr17	49205707	49228225
ABI3_chr17_49205707_49228225	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	CHS	EAS	ABI3	chr17	49205707	49228225
ABLIM2_chr4_7960327_8163813	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0201	CHS	EAS	ABLIM2	chr4	7960327	8163813
ABLIM2_chr4_7960327_8163813	HG00609	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0171	CHS	EAS	ABLIM2	chr4	7960327	8163813
ABLIM3_chr5_149136493_149265542	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0061	CHS	EAS	ABLIM3	chr5	149136493	149265542
ABLIM3_chr5_149136493_149265542	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0160	CHS	EAS	ABLIM3	chr5	149136493	149265542
ABRACL_chr6_139023745_139048302	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0011	CHS	EAS	ABRACL	chr6	139023745	139048302
ABRACL_chr6_139023745_139048302	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0072	CHS	EAS	ABRACL	chr6	139023745	139048302
ABRAXAS2_chr10_124796819_124841667	HG00609	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0146	CHS	EAS	ABRAXAS2	chr10	124796819	124841667
ABRAXAS2_chr10_124796819_124841667	HG00609	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0006	CHS	EAS	ABRAXAS2	chr10	124796819	124841667
ABRA_chr8_106754483_106775244	HG00609	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	CHS	EAS	ABRA	chr8	106754483	106775244
ABRA_chr8_106754483_106775244	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABRA	chr8	106754483	106775244
ABR_chr17_998519_1184981	HG00609	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0151	CHS	EAS	ABR	chr17	998519	1184981
ABR_chr17_998519_1184981	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	CHS	EAS	ABR	chr17	998519	1184981
ABTB1_chr3_127667952_127685926	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABTB1	chr3	127667952	127685926
ABTB1_chr3_127667952_127685926	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ABTB1	chr3	127667952	127685926
ABTB2_chr11_34145987_34363010	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	CHS	EAS	ABTB2	chr11	34145987	34363010
ABTB2_chr11_34145987_34363010	HG00609	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0211	CHS	EAS	ABTB2	chr11	34145987	34363010
ABTB3_chr12_107313434_107664642	HG00609	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0128	CHS	EAS	ABTB3	chr12	107313434	107664642
ABTB3_chr12_107313434_107664642	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	CHS	EAS	ABTB3	chr12	107313434	107664642
ACAA1_chr3_38117715_38142127	HG00609	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	ACAA1	chr3	38117715	38142127
ACAA1_chr3_38117715_38142127	HG00609	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	ACAA1	chr3	38117715	38142127
ACAA2_chr18_49777164_49818533	HG00609	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0303	CHS	EAS	ACAA2	chr18	49777164	49818533
ACAA2_chr18_49777164_49818533	HG00609	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0013	CHS	EAS	ACAA2	chr18	49777164	49818533
ACACA_chr17_37079992_37411836	HG00609	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0220	CHS	EAS	ACACA	chr17	37079992	37411836
ACACA_chr17_37079992_37411836	HG00609	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0261	CHS	EAS	ACACA	chr17	37079992	37411836